Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SUGT1 Sequence: fasta or formatted (365aa) NCBI GI: 195963398
Description:

suppressor of G2 allele of SKP1 isoform a

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [333aa] suppressor of G2 allele of SKP1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         31           5
 C cysteine            1.4          5           1
 D aspartate           6.0         22           2
 E glutamate           9.3         34           3
 F phenylalanine       3.0         11           2
 G glycine             5.2         19           2
 H histidine           1.4          5           1
 I isoleucine          4.4         16           2
 K lysine              9.0         33           2
 L leucine             8.8         32           2
 M methionine          1.6          6           1
 N asparagine          4.9         18           2
 P proline             4.1         15           2
 Q glutamine           5.8         21           2
 R arginine            2.7         10           1
 S serine              7.7         28           3
 T threonine           4.9         18           1
 V valine              5.8         21           2
 W tryptophan          1.9          7           1
 Y tyrosine            3.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of G2 allele of SKP1 isoform a 
SUGT1                 0.886   suppressor of G2 allele of SKP1 isoform b 
TTC13                 0.045   tetratricopeptide repeat domain 13 isoform b 
TTC13                 0.045   tetratricopeptide repeat domain 13 isoform a 
CACYBP                0.042   calcyclin binding protein isoform 1 
CACYBP                0.042   calcyclin binding protein isoform 2 
STAP2                 0.041   signal transducing adaptor family member 2 isoform 1...
SGTB                  0.035   small glutamine-rich tetratricopeptide repeat (TPR)-...
SGTA                  0.035   small glutamine-rich tetratricopeptide 
REL                   0.034   v-rel reticuloendotheliosis viral oncogene homolog [H...
DNAJC7                0.032   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
CNGA1                 0.031   cyclic nucleotide gated channel alpha 1 isoform 1 [...
SULT1C2               0.031   sulfotransferase family, cytosolic, 1C, member 1 iso...
PODXL                 0.031   podocalyxin-like isoform 1 precursor 
STIP1                 0.030   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
CHORDC1               0.030   cysteine and histidine-rich domain-containing prote...
CHORDC1               0.030   cysteine and histidine-rich domain-containing prote...
SLC3A2                0.028   solute carrier family 3, member 2 isoform b 
SLC3A2                0.028   solute carrier family 3, member 2 isoform d 
SLC3A2                0.028   solute carrier family 3, member 2 isoform c 
LOC100132815          0.027   PREDICTED: hypothetical protein 
LOC100132815          0.027   PREDICTED: hypothetical protein 
LOC100132815          0.027   PREDICTED: hypothetical protein 
UTY                   0.027   tetratricopeptide repeat protein isoform 1 
LOC100128260          0.027   PREDICTED: hCG_1742852 
LOC100128260          0.027   PREDICTED: hCG_1742852 
LOC100288773          0.027   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.027   PREDICTED: hCG_1742852 
USP19                 0.027   ubiquitin thioesterase 19 
C16orf89              0.027   hypothetical protein LOC146556 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press