Guide to the Human Genome
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Name: SUGT1 Sequence: fasta or formatted (333aa) NCBI GI: 5730041
Description:

suppressor of G2 allele of SKP1 isoform b

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [365aa] suppressor of G2 allele of SKP1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         28           5
 C cysteine            1.5          5           1
 D aspartate           6.0         20           2
 E glutamate           9.9         33           3
 F phenylalanine       3.0         10           2
 G glycine             4.2         14           2
 H histidine           1.2          4           1
 I isoleucine          4.2         14           2
 K lysine              9.9         33           2
 L leucine             8.4         28           2
 M methionine          1.8          6           1
 N asparagine          5.4         18           2
 P proline             3.9         13           2
 Q glutamine           5.4         18           2
 R arginine            2.7          9           1
 S serine              7.5         25           3
 T threonine           4.5         15           1
 V valine              6.0         20           2
 W tryptophan          2.1          7           1
 Y tyrosine            3.9         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of G2 allele of SKP1 isoform b 
SUGT1                 0.971   suppressor of G2 allele of SKP1 isoform a 
CACYBP                0.046   calcyclin binding protein isoform 1 
CACYBP                0.046   calcyclin binding protein isoform 2 
TTC13                 0.045   tetratricopeptide repeat domain 13 isoform b 
TTC13                 0.045   tetratricopeptide repeat domain 13 isoform a 
STIP1                 0.042   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
SGTA                  0.039   small glutamine-rich tetratricopeptide 
SGTB                  0.039   small glutamine-rich tetratricopeptide repeat (TPR)-...
DNAJC7                0.037   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
CHORDC1               0.035   cysteine and histidine-rich domain-containing prote...
CHORDC1               0.035   cysteine and histidine-rich domain-containing prote...
TTC4                  0.032   tetratricopeptide repeat domain 4 
FKBP4                 0.029   FK506 binding protein 52 
TTC16                 0.028   tetratricopeptide repeat domain 16 
DNAJC7                0.026   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
ITGB1BP2              0.025   integrin beta 1 binding protein 2 
TTC31                 0.023   tetratricopeptide repeat domain 31 
FKBPL                 0.022   WAF-1/CIP1 stabilizing protein 39 
STUB1                 0.022   STIP1 homology and U-box containing protein 1 
DYX1C1                0.022   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
DYX1C1                0.022   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.022   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
USP19                 0.022   ubiquitin thioesterase 19 
WDTC1                 0.020   WD and tetratricopeptide repeats 1 
TTC28                 0.020   tetratricopeptide repeat domain 28 
TTC6                  0.020   PREDICTED: tetratricopeptide repeat domain 6 
TTC6                  0.020   PREDICTED: tetratricopeptide repeat domain 6 
C14orf25              0.020   PREDICTED: chromosome 14 open reading frame 25 [Hom...
NUDCD1                0.018   NudC domain containing 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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