Guide to the Human Genome
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Name: KIAA1109 Sequence: fasta or formatted (5005aa) NCBI GI: 150378498
Description:

fragile site-associated protein

Referenced in:

Protein Composition and Structure
Additional Stress Response Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        270           3
 C cysteine            1.5         74           1
 D aspartate           5.6        279           3
 E glutamate           6.1        306           2
 F phenylalanine       3.6        182           3
 G glycine             6.0        300           3
 H histidine           2.9        145           2
 I isoleucine          5.0        250           3
 K lysine              5.6        282           5
 L leucine             8.8        439           2
 M methionine          2.5        123           2
 N asparagine          4.2        211           2
 P proline             5.7        284           4
 Q glutamine           4.4        220           2
 R arginine            4.7        234           3
 S serine             10.9        545           7
 T threonine           7.5        374           2
 V valine              6.1        306           3
 W tryptophan          1.3         63           2
 Y tyrosine            2.4        118           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fragile site-associated protein 
MUC17                 0.002   mucin 17 
SRRM2                 0.002   splicing coactivator subunit SRm300 
CRKRS                 0.002   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.002   Cdc2-related kinase, arginine/serine-rich isoform 1...
MUC12                 0.002   PREDICTED: mucin 12 
MUC12                 0.002   PREDICTED: mucin 12, cell surface associated 
USP31                 0.001   ubiquitin specific peptidase 31 
CDC2L2                0.001   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.001   cell division cycle 2-like 2 isoform 1 
DSPP                  0.001   dentin sialophosphoprotein preproprotein 
FIGN                  0.001   fidgetin 
CDC2L1                0.001   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.001   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.001   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.001   cell division cycle 2-like 1 (PITSLRE proteins) isof...
IQGAP1                0.001   IQ motif containing GTPase activating protein 1 [Homo...
MUC16                 0.001   mucin 16 
IWS1                  0.001   IWS1 homolog 
KIF21B                0.001   kinesin family member 21B 
LOC643446             0.001   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.001   PREDICTED: similar to ribonucleic acid binding prot...
LOC100288540          0.001   PREDICTED: hypothetical protein XP_002342775 
LOC643446             0.001   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.001   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.001   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.001   PREDICTED: similar to ribonucleic acid binding prote...
NDUFV3                0.001   NADH-ubiquinone oxidoreductase flavoprotein 3 isofor...
MLLT3                 0.001   myeloid/lymphoid or mixed-lineage leukemia (trithor...
POM121                0.001   nuclear pore membrane protein 121 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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