Guide to the Human Genome
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Name: SLC6A9 Sequence: fasta or formatted (706aa) NCBI GI: 67782315
Description:

solute carrier family 6 member 9 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [652aa] solute carrier family 6 member 9 isoform 1
alt prot [633aa] solute carrier family 6 member 9 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         55           3
 C cysteine            2.4         17           1
 D aspartate           3.0         21           2
 E glutamate           2.4         17           2
 F phenylalanine       6.5         46           3
 G glycine             8.5         60           3
 H histidine           2.0         14           1
 I isoleucine          6.4         45           2
 K lysine              2.1         15           2
 L leucine            11.6         82           3
 M methionine          3.1         22           2
 N asparagine          3.8         27           2
 P proline             5.9         42           3
 Q glutamine           3.5         25           1
 R arginine            3.8         27           1
 S serine              7.4         52           2
 T threonine           4.7         33           1
 V valine              7.6         54           2
 W tryptophan          2.4         17           1
 Y tyrosine            5.0         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.898   solute carrier family 6 member 9 isoform 1 
SLC6A9                0.886   solute carrier family 6 member 9 isoform 3 
SLC6A5                0.426   solute carrier family 6 (neurotransmitter transporte...
SLC6A7                0.417   solute carrier family 6, member 7 
SLC6A14               0.350   solute carrier family 6 (amino acid transporter), mem...
SLC6A11               0.345   solute carrier family 6 (neurotransmitter transporter...
SLC6A1                0.345   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.343   solute carrier family 6 member 8 isoform 1 
SLC6A13               0.342   solute carrier family 6 (neurotransmitter transporte...
SLC6A12               0.336   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.336   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.336   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.331   solute carrier family 6 member 8 isoform 2 
SLC6A4                0.324   solute carrier family 6 member 4 
SLC6A2                0.318   solute carrier family 6 member 2 
SLC6A3                0.317   solute carrier family 6 (neurotransmitter transporter...
SLC6A6                0.311   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.311   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.279   solute carrier family 6 member 8 isoform 3 
SLC6A19               0.257   solute carrier family 6, member 19 
SLC6A18               0.238   solute carrier family 6, member 18 
SLC6A20               0.237   solute carrier family 6, member 20 isoform 1 
SLC6A20               0.194   solute carrier family 6, member 20 isoform 2 
SLC6A17               0.191   solute carrier family 6, member 17 
SLC6A15               0.178   solute carrier family 6, member 15 isoform 1 
SLC6A16               0.139   solute carrier family 6, member 16 
SLC6A15               0.130   solute carrier family 6, member 15 isoform 3 
SLC6A15               0.101   solute carrier family 6, member 15 isoform 2 
SLC6A6                0.094   solute carrier family 6 (neurotransmitter transport...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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