Guide to the Human Genome
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Name: SLC6A6 Sequence: fasta or formatted (200aa) NCBI GI: 197276625
Description:

solute carrier family 6 (neurotransmitter transporter, taurine), member 6 isoform b

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [620aa] solute carrier family 6 (neurotransmitter transporter, taurine), ...
alt prot [620aa] solute carrier family 6 (neurotransmitter transporter, taurine), ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          8           1
 C cysteine            3.0          6           1
 D aspartate           2.5          5           1
 E glutamate           6.0         12           1
 F phenylalanine       7.5         15           2
 G glycine             8.5         17           3
 H histidine           2.0          4           1
 I isoleucine          8.0         16           3
 K lysine              7.0         14           1
 L leucine             8.0         16           2
 M methionine          1.5          3           1
 N asparagine          3.5          7           1
 P proline             6.5         13           2
 Q glutamine           2.5          5           1
 R arginine            2.0          4           1
 S serine              8.0         16           2
 T threonine           5.0         10           1
 V valine              6.0         12           2
 W tryptophan          4.0          8           1
 Y tyrosine            4.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6 (neurotransmitter transport... 
SLC6A6                1.000   solute carrier family 6 (neurotransmitter transport...
SLC6A6                1.000   solute carrier family 6 (neurotransmitter transporte...
SLC6A12               0.522   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.522   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.522   solute carrier family 6 (neurotransmitter transport...
SLC6A11               0.517   solute carrier family 6 (neurotransmitter transporter...
SLC6A13               0.512   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.423   solute carrier family 6 member 8 isoform 1 
SLC6A8                0.423   solute carrier family 6 member 8 isoform 2 
SLC6A1                0.403   solute carrier family 6 (neurotransmitter transport...
SLC6A2                0.399   solute carrier family 6 member 2 
SLC6A4                0.381   solute carrier family 6 member 4 
SLC6A3                0.381   solute carrier family 6 (neurotransmitter transporter...
SLC6A7                0.354   solute carrier family 6, member 7 
SLC6A5                0.351   solute carrier family 6 (neurotransmitter transporte...
SLC6A9                0.339   solute carrier family 6 member 9 isoform 1 
SLC6A9                0.332   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.332   solute carrier family 6 member 9 isoform 2 
SLC6A14               0.319   solute carrier family 6 (amino acid transporter), mem...
SLC6A17               0.314   solute carrier family 6, member 17 
SLC6A15               0.304   solute carrier family 6, member 15 isoform 2 
SLC6A15               0.304   solute carrier family 6, member 15 isoform 1 
SLC6A20               0.285   solute carrier family 6, member 20 isoform 1 
SLC6A20               0.285   solute carrier family 6, member 20 isoform 2 
SLC6A18               0.280   solute carrier family 6, member 18 
SLC6A19               0.275   solute carrier family 6, member 19 
SLC6A16               0.198   solute carrier family 6, member 16 
SLC6A8                0.186   solute carrier family 6 member 8 isoform 3 
SLC6A15               0.136   solute carrier family 6, member 15 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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