Guide to the Human Genome
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Name: SLC6A3 Sequence: fasta or formatted (620aa) NCBI GI: 4507041
Description:

solute carrier family 6 (neurotransmitter transporter, dopamine), member 3

Referenced in:

Catecholamines
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         48           2
 C cysteine            2.1         13           1
 D aspartate           3.7         23           2
 E glutamate           3.4         21           1
 F phenylalanine       7.1         44           2
 G glycine             8.2         51           3
 H histidine           1.9         12           1
 I isoleucine          6.5         40           2
 K lysine              3.4         21           2
 L leucine            11.6         72           3
 M methionine          2.1         13           1
 N asparagine          2.9         18           2
 P proline             4.7         29           2
 Q glutamine           2.4         15           2
 R arginine            3.2         20           1
 S serine              7.7         48           2
 T threonine           5.3         33           2
 V valine              9.4         58           4
 W tryptophan          2.7         17           1
 Y tyrosine            3.9         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6 (neurotransmitter transporter... 
SLC6A2                0.667   solute carrier family 6 member 2 
SLC6A4                0.475   solute carrier family 6 member 4 
SLC6A1                0.418   solute carrier family 6 (neurotransmitter transport...
SLC6A5                0.400   solute carrier family 6 (neurotransmitter transporte...
SLC6A12               0.396   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.396   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.396   solute carrier family 6 (neurotransmitter transport...
SLC6A7                0.391   solute carrier family 6, member 7 
SLC6A13               0.390   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.389   solute carrier family 6 member 8 isoform 1 
SLC6A6                0.385   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.385   solute carrier family 6 (neurotransmitter transporte...
SLC6A11               0.378   solute carrier family 6 (neurotransmitter transporter...
SLC6A8                0.373   solute carrier family 6 member 8 isoform 2 
SLC6A9                0.366   solute carrier family 6 member 9 isoform 1 
SLC6A9                0.365   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.365   solute carrier family 6 member 9 isoform 2 
SLC6A14               0.365   solute carrier family 6 (amino acid transporter), mem...
SLC6A8                0.309   solute carrier family 6 member 8 isoform 3 
SLC6A19               0.271   solute carrier family 6, member 19 
SLC6A18               0.264   solute carrier family 6, member 18 
SLC6A15               0.245   solute carrier family 6, member 15 isoform 1 
SLC6A20               0.209   solute carrier family 6, member 20 isoform 1 
SLC6A17               0.200   solute carrier family 6, member 17 
SLC6A15               0.190   solute carrier family 6, member 15 isoform 3 
SLC6A20               0.171   solute carrier family 6, member 20 isoform 2 
SLC6A6                0.124   solute carrier family 6 (neurotransmitter transport...
SLC6A15               0.112   solute carrier family 6, member 15 isoform 2 
SLC6A16               0.112   solute carrier family 6, member 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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