Guide to the Human Genome
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Name: SLC6A15 Sequence: fasta or formatted (730aa) NCBI GI: 33354281
Description:

solute carrier family 6, member 15 isoform 1

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [289aa] solute carrier family 6, member 15 isoform 2
alt prot [623aa] solute carrier family 6, member 15 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         41           2
 C cysteine            2.2         16           2
 D aspartate           4.5         33           3
 E glutamate           5.6         41           3
 F phenylalanine       6.6         48           2
 G glycine             6.8         50           3
 H histidine           1.2          9           2
 I isoleucine          7.9         58           2
 K lysine              4.8         35           1
 L leucine            10.7         78           2
 M methionine          3.2         23           1
 N asparagine          4.5         33           2
 P proline             4.7         34           2
 Q glutamine           2.5         18           2
 R arginine            2.7         20           2
 S serine              7.8         57           3
 T threonine           4.0         29           2
 V valine              8.6         63           2
 W tryptophan          1.8         13           1
 Y tyrosine            4.2         31           4
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6, member 15 isoform 1 
SLC6A15               0.852   solute carrier family 6, member 15 isoform 3 
SLC6A17               0.677   solute carrier family 6, member 17 
SLC6A20               0.353   solute carrier family 6, member 20 isoform 1 
SLC6A15               0.344   solute carrier family 6, member 15 isoform 2 
SLC6A18               0.339   solute carrier family 6, member 18 
SLC6A19               0.339   solute carrier family 6, member 19 
SLC6A20               0.312   solute carrier family 6, member 20 isoform 2 
SLC6A16               0.292   solute carrier family 6, member 16 
SLC6A7                0.231   solute carrier family 6, member 7 
SLC6A2                0.227   solute carrier family 6 member 2 
SLC6A4                0.216   solute carrier family 6 member 4 
SLC6A3                0.209   solute carrier family 6 (neurotransmitter transporter...
SLC6A8                0.183   solute carrier family 6 member 8 isoform 1 
SLC6A9                0.175   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.175   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.175   solute carrier family 6 member 9 isoform 1 
SLC6A12               0.175   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.175   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.175   solute carrier family 6 (neurotransmitter transport...
SLC6A14               0.171   solute carrier family 6 (amino acid transporter), mem...
SLC6A8                0.171   solute carrier family 6 member 8 isoform 2 
SLC6A5                0.171   solute carrier family 6 (neurotransmitter transporte...
SLC6A13               0.168   solute carrier family 6 (neurotransmitter transporte...
SLC6A1                0.166   solute carrier family 6 (neurotransmitter transport...
SLC6A11               0.161   solute carrier family 6 (neurotransmitter transporter...
SLC6A6                0.159   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.159   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.121   solute carrier family 6 member 8 isoform 3 
SLC6A6                0.085   solute carrier family 6 (neurotransmitter transport...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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