Guide to the Human Genome
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Name: SLC6A16 Sequence: fasta or formatted (736aa) NCBI GI: 55749589
Description:

solute carrier family 6, member 16

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         46           2
 C cysteine            2.4         18           2
 D aspartate           1.9         14           1
 E glutamate           3.9         29           2
 F phenylalanine       7.1         52           2
 G glycine             6.0         44           2
 H histidine           1.2          9           1
 I isoleucine          6.8         50           2
 K lysine              4.1         30           2
 L leucine            12.1         89           3
 M methionine          3.5         26           2
 N asparagine          2.7         20           2
 P proline             6.1         45           2
 Q glutamine           3.5         26           2
 R arginine            2.9         21           2
 S serine              9.8         72           2
 T threonine           5.8         43           2
 V valine              7.9         58           4
 W tryptophan          3.0         22           1
 Y tyrosine            3.0         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6, member 16 
SLC6A15               0.289   solute carrier family 6, member 15 isoform 1 
SLC6A17               0.289   solute carrier family 6, member 17 
SLC6A15               0.255   solute carrier family 6, member 15 isoform 3 
SLC6A20               0.232   solute carrier family 6, member 20 isoform 1 
SLC6A19               0.229   solute carrier family 6, member 19 
SLC6A18               0.206   solute carrier family 6, member 18 
SLC6A20               0.204   solute carrier family 6, member 20 isoform 2 
SLC6A14               0.148   solute carrier family 6 (amino acid transporter), mem...
SLC6A2                0.143   solute carrier family 6 member 2 
SLC6A5                0.138   solute carrier family 6 (neurotransmitter transporte...
SLC6A4                0.137   solute carrier family 6 member 4 
SLC6A9                0.135   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.135   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.135   solute carrier family 6 member 9 isoform 1 
SLC6A1                0.134   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.127   solute carrier family 6 member 8 isoform 1 
SLC6A15               0.121   solute carrier family 6, member 15 isoform 2 
SLC6A11               0.119   solute carrier family 6 (neurotransmitter transporter...
SLC6A13               0.111   solute carrier family 6 (neurotransmitter transporte...
SLC6A6                0.100   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.100   solute carrier family 6 (neurotransmitter transporte...
SLC6A12               0.096   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.096   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.096   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.095   solute carrier family 6 member 8 isoform 2 
SLC6A8                0.095   solute carrier family 6 member 8 isoform 3 
SLC6A3                0.094   solute carrier family 6 (neurotransmitter transporter...
SLC6A7                0.090   solute carrier family 6, member 7 
SLC6A6                0.055   solute carrier family 6 (neurotransmitter transport...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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