Guide to the Human Genome
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Name: SLC6A15 Sequence: fasta or formatted (289aa) NCBI GI: 21361693
Description:

solute carrier family 6, member 15 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [623aa] solute carrier family 6, member 15 isoform 3
alt prot [730aa] solute carrier family 6, member 15 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         14           2
 C cysteine            2.8          8           1
 D aspartate           4.5         13           3
 E glutamate           6.2         18           2
 F phenylalanine       5.2         15           2
 G glycine             7.6         22           3
 H histidine           0.7          2           1
 I isoleucine          7.3         21           2
 K lysine              4.5         13           1
 L leucine            10.7         31           2
 M methionine          2.1          6           1
 N asparagine          4.2         12           1
 P proline             4.2         12           1
 Q glutamine           4.2         12           2
 R arginine            2.4          7           2
 S serine             10.0         29           3
 T threonine           3.8         11           2
 V valine              8.0         23           2
 W tryptophan          2.8          8           1
 Y tyrosine            4.2         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6, member 15 isoform 2 
SLC6A15               0.882   solute carrier family 6, member 15 isoform 1 
SLC6A17               0.624   solute carrier family 6, member 17 
SLC6A15               0.504   solute carrier family 6, member 15 isoform 3 
SLC6A20               0.396   solute carrier family 6, member 20 isoform 1 
SLC6A20               0.394   solute carrier family 6, member 20 isoform 2 
SLC6A19               0.385   solute carrier family 6, member 19 
SLC6A18               0.383   solute carrier family 6, member 18 
SLC6A16               0.313   solute carrier family 6, member 16 
SLC6A12               0.293   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.293   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.293   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.290   solute carrier family 6 member 8 isoform 1 
SLC6A8                0.290   solute carrier family 6 member 8 isoform 2 
SLC6A6                0.279   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.279   solute carrier family 6 (neurotransmitter transporte...
SLC6A14               0.277   solute carrier family 6 (amino acid transporter), mem...
SLC6A4                0.274   solute carrier family 6 member 4 
SLC6A13               0.274   solute carrier family 6 (neurotransmitter transporte...
SLC6A11               0.267   solute carrier family 6 (neurotransmitter transporter...
SLC6A1                0.265   solute carrier family 6 (neurotransmitter transport...
SLC6A7                0.263   solute carrier family 6, member 7 
SLC6A9                0.254   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.254   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.254   solute carrier family 6 member 9 isoform 1 
SLC6A5                0.254   solute carrier family 6 (neurotransmitter transporte...
SLC6A2                0.249   solute carrier family 6 member 2 
SLC6A3                0.246   solute carrier family 6 (neurotransmitter transporter...
SLC6A6                0.217   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.133   solute carrier family 6 member 8 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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