Guide to the Human Genome
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Name: SLC6A15 Sequence: fasta or formatted (623aa) NCBI GI: 226437581
Description:

solute carrier family 6, member 15 isoform 3

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [289aa] solute carrier family 6, member 15 isoform 2
alt prot [730aa] solute carrier family 6, member 15 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         35           2
 C cysteine            2.4         15           2
 D aspartate           3.5         22           2
 E glutamate           4.8         30           3
 F phenylalanine       7.2         45           2
 G glycine             6.7         42           2
 H histidine           1.4          9           2
 I isoleucine          8.8         55           2
 K lysine              4.3         27           1
 L leucine            10.4         65           2
 M methionine          3.5         22           1
 N asparagine          4.5         28           2
 P proline             4.8         30           2
 Q glutamine           2.2         14           2
 R arginine            2.7         17           2
 S serine              8.0         50           3
 T threonine           4.2         26           2
 V valine              8.5         53           2
 W tryptophan          1.8         11           1
 Y tyrosine            4.3         27           4
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6, member 15 isoform 3 
SLC6A15               1.000   solute carrier family 6, member 15 isoform 1 
SLC6A17               0.690   solute carrier family 6, member 17 
SLC6A20               0.357   solute carrier family 6, member 20 isoform 1 
SLC6A19               0.337   solute carrier family 6, member 19 
SLC6A18               0.336   solute carrier family 6, member 18 
SLC6A20               0.309   solute carrier family 6, member 20 isoform 2 
SLC6A16               0.303   solute carrier family 6, member 16 
SLC6A15               0.231   solute carrier family 6, member 15 isoform 2 
SLC6A7                0.219   solute carrier family 6, member 7 
SLC6A2                0.213   solute carrier family 6 member 2 
SLC6A4                0.200   solute carrier family 6 member 4 
SLC6A3                0.190   solute carrier family 6 (neurotransmitter transporter...
SLC6A8                0.160   solute carrier family 6 member 8 isoform 1 
SLC6A9                0.150   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.150   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.150   solute carrier family 6 member 9 isoform 1 
SLC6A12               0.149   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.149   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.149   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.146   solute carrier family 6 member 8 isoform 2 
SLC6A14               0.146   solute carrier family 6 (amino acid transporter), mem...
SLC6A5                0.143   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.142   solute carrier family 6 member 8 isoform 3 
SLC6A13               0.140   solute carrier family 6 (neurotransmitter transporte...
SLC6A1                0.140   solute carrier family 6 (neurotransmitter transport...
SLC6A11               0.134   solute carrier family 6 (neurotransmitter transporter...
SLC6A6                0.132   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.132   solute carrier family 6 (neurotransmitter transporte...
SLC6A6                0.045   solute carrier family 6 (neurotransmitter transport...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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