Guide to the Human Genome
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Name: SLC6A7 Sequence: fasta or formatted (636aa) NCBI GI: 134304856
Description:

solute carrier family 6, member 7

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         45           2
 C cysteine            2.2         14           1
 D aspartate           3.0         19           2
 E glutamate           3.9         25           4
 F phenylalanine       6.3         40           3
 G glycine             9.0         57           3
 H histidine           1.6         10           2
 I isoleucine          5.3         34           2
 K lysine              3.0         19           2
 L leucine            14.9         95           3
 M methionine          4.1         26           2
 N asparagine          2.2         14           1
 P proline             5.0         32           2
 Q glutamine           2.8         18           2
 R arginine            3.3         21           1
 S serine              6.4         41           2
 T threonine           5.0         32           2
 V valine              7.2         46           3
 W tryptophan          2.7         17           2
 Y tyrosine            4.9         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6, member 7 
SLC6A9                0.469   solute carrier family 6 member 9 isoform 1 
SLC6A9                0.467   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.467   solute carrier family 6 member 9 isoform 2 
SLC6A5                0.463   solute carrier family 6 (neurotransmitter transporte...
SLC6A14               0.413   solute carrier family 6 (amino acid transporter), mem...
SLC6A13               0.396   solute carrier family 6 (neurotransmitter transporte...
SLC6A1                0.394   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.390   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.390   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.390   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.387   solute carrier family 6 member 8 isoform 1 
SLC6A2                0.383   solute carrier family 6 member 2 
SLC6A11               0.383   solute carrier family 6 (neurotransmitter transporter...
SLC6A3                0.380   solute carrier family 6 (neurotransmitter transporter...
SLC6A8                0.376   solute carrier family 6 member 8 isoform 2 
SLC6A6                0.371   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.371   solute carrier family 6 (neurotransmitter transporte...
SLC6A4                0.367   solute carrier family 6 member 4 
SLC6A8                0.312   solute carrier family 6 member 8 isoform 3 
SLC6A18               0.280   solute carrier family 6, member 18 
SLC6A19               0.278   solute carrier family 6, member 19 
SLC6A17               0.265   solute carrier family 6, member 17 
SLC6A15               0.263   solute carrier family 6, member 15 isoform 1 
SLC6A20               0.249   solute carrier family 6, member 20 isoform 1 
SLC6A15               0.212   solute carrier family 6, member 15 isoform 3 
SLC6A20               0.202   solute carrier family 6, member 20 isoform 2 
SLC6A15               0.117   solute carrier family 6, member 15 isoform 2 
SLC6A6                0.112   solute carrier family 6 (neurotransmitter transport...
SLC6A16               0.104   solute carrier family 6, member 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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