CTDSPL2 13

Name: CTDSPL2	Sequence: fasta or formatted (466aa)		NCBI GI: 100815975
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 23 2 C cysteine 0.6 3 1 D aspartate 5.8 27 2 E glutamate 8.4 39 2 F phenylalanine 4.1 19 2 G glycine 4.1 19 2 H histidine 1.7 8 1 I isoleucine 5.4 25 3 K lysine 6.4 30 2 L leucine 9.7 45 2 M methionine 1.3 6 1 N asparagine 6.0 28 2 P proline 6.9 32 2 Q glutamine 4.7 22 2 R arginine 6.7 31 2 S serine 8.4 39 2 T threonine 6.2 29 3 V valine 5.6 26 1 W tryptophan 0.4 2 1 Y tyrosine 2.8 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CTD (carboxy-terminal domain, RNA polymerase II, po... CTDSPL 0.149 small CTD phosphatase 3 isoform 2 CTDSPL 0.145 small CTD phosphatase 3 isoform 1 CTDSP1 0.141 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSP1 0.140 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSP2 0.139 nuclear LIM interactor-interacting factor 2 DULLARD 0.108 dullard homolog DULLARD 0.108 dullard homolog TIMM50 0.056 translocase of inner mitochondrial membrane 50 homol... CTDP1 0.039 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDP1 0.039 CTD (carboxy-terminal domain, RNA polymerase II, pol... NKTR 0.013 natural killer-tumor recognition sequence PPARGC1A 0.013 peroxisome proliferator-activated receptor gamma, coa... CDKN2AIP 0.012 CDKN2A interacting protein BOD1L 0.012 biorientation of chromosomes in cell division 1-like... EHBP1 0.011 EH domain binding protein 1 isoform 3 EHBP1 0.011 EH domain binding protein 1 isoform 3 EHBP1 0.011 EH domain binding protein 1 isoform 2 EHBP1 0.011 EH domain binding protein 1 isoform 1 HIPK3 0.010 homeodomain interacting protein kinase 3 isoform 2 ... GPATCH8 0.010 G patch domain containing 8 WWP2 0.009 WW domain containing E3 ubiquitin protein ligase 2 i... WWP2 0.009 WW domain containing E3 ubiquitin protein ligase 2 i... AFF4 0.009 ALL1 fused gene from 5q31 UBLCP1 0.009 ubiquitin-like domain containing CTD phosphatase 1 ... ATXN7L1 0.008 ataxin 7-like 1 isoform 1 ATXN7L1 0.008 ataxin 7-like 1 isoform 3 HIPK3 0.008 homeodomain interacting protein kinase 3 isoform 1 ... NCOR1 0.008 nuclear receptor co-repressor 1 LIG1 0.008 DNA ligase I Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.