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Search of human proteins with 67078404
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|67078404 trans-2-enoyl-CoA reductase, mitochondrial isoform
a [Homo sapiens]
(373 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|67078404 trans-2-enoyl-CoA reductase, mitochondrial isoform a... 744 0.0
gi|67078406 trans-2-enoyl-CoA reductase, mitochondrial isoform b... 588 e-168
gi|18379349 vesicle amine transport protein 1 [Homo sapiens] 96 4e-20
gi|194239674 crystallin, zeta isoform a [Homo sapiens] 80 4e-15
gi|13236495 crystallin, zeta isoform a [Homo sapiens] 80 4e-15
gi|194239676 crystallin, zeta isoform b [Homo sapiens] 79 9e-15
gi|24308257 vesicle amine transport protein 1 homolog (T. califo... 77 2e-14
gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo sa... 63 5e-10
gi|22538446 tumor protein p53 inducible protein 3 [Homo sapiens] 62 1e-09
gi|22538444 tumor protein p53 inducible protein 3 [Homo sapiens] 62 1e-09
gi|226056130 prostaglandin reductase 1 isoform 2 [Homo sapiens] 59 5e-09
gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo sa... 59 9e-09
gi|226059159 prostaglandin reductase 1 isoform 1 [Homo sapiens] 58 2e-08
gi|226059133 prostaglandin reductase 1 isoform 1 [Homo sapiens] 58 2e-08
gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo sa... 58 2e-08
gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo s... 52 7e-07
gi|41872631 fatty acid synthase [Homo sapiens] 52 1e-06
gi|28557745 zinc binding alcohol dehydrogenase domain containing... 49 7e-06
gi|71565152 class II alcohol dehydrogenase, pi subunit [Homo sap... 49 7e-06
gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit ... 49 1e-05
gi|47519420 reticulon 4 interacting protein 1 precursor [Homo sa... 47 4e-05
gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens] 41 0.002
gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens] 41 0.002
gi|156627571 sorbitol dehydrogenase [Homo sapiens] 39 0.010
gi|90669511 crystallin, zeta-like 1 [Homo sapiens] 33 0.41
gi|110347463 human immunodeficiency virus type I enhancer bindin... 31 1.6
gi|197927207 crystallin, zeta isoform c [Homo sapiens] 31 2.1
gi|7705353 three prime repair exonuclease 1 isoform a [Homo sapi... 30 4.6
gi|10190746 retinol dehydrogenase 14 (all-trans and 9-cis) [Homo... 30 4.6
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 29 6.0
>gi|67078404 trans-2-enoyl-CoA reductase, mitochondrial isoform a
[Homo sapiens]
Length = 373
Score = 744 bits (1920), Expect = 0.0
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 1 MWVCSTLWRVRTPARQWRGLLPASGCHGPAASSYSASAEPARVRALVYGHHGDPAKVVEL 60
MWVCSTLWRVRTPARQWRGLLPASGCHGPAASSYSASAEPARVRALVYGHHGDPAKVVEL
Sbjct: 1 MWVCSTLWRVRTPARQWRGLLPASGCHGPAASSYSASAEPARVRALVYGHHGDPAKVVEL 60
Query: 61 KNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVT 120
KNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVT
Sbjct: 61 KNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVT 120
Query: 121 GLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQ 180
GLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQ
Sbjct: 121 GLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQ 180
Query: 181 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEE 240
LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEE
Sbjct: 181 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEE 240
Query: 241 ELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLL 300
ELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLL
Sbjct: 241 ELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLL 300
Query: 301 IFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS 360
IFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS
Sbjct: 301 IFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS 360
Query: 361 MKPFISSKQILTM 373
MKPFISSKQILTM
Sbjct: 361 MKPFISSKQILTM 373
>gi|67078406 trans-2-enoyl-CoA reductase, mitochondrial isoform b
[Homo sapiens]
Length = 297
Score = 588 bits (1516), Expect = e-168
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 77 MLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLG 136
MLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLG
Sbjct: 1 MLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLG 60
Query: 137 TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGV 196
TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGV
Sbjct: 61 TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGV 120
Query: 197 GQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQ 256
GQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQ
Sbjct: 121 GQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQ 180
Query: 257 PRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWK 316
PRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWK
Sbjct: 181 PRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWK 240
Query: 317 KDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 373
KDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM
Sbjct: 241 KDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 297
>gi|18379349 vesicle amine transport protein 1 [Homo sapiens]
Length = 393
Score = 96.3 bits (238), Expect = 4e-20
Identities = 84/274 (30%), Positives = 124/274 (45%), Gaps = 23/274 (8%)
Query: 23 ASGCHGPAAS--SYSASAEPARVRALVYGHHGDPAKV-VELKNLELAAVRGSDVRVKMLA 79
AS PAAS + +A+A P +R LV G KV ++ + A + +++ A
Sbjct: 26 ASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRA 85
Query: 80 APINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWR 139
+N +D+ QG Y LP LP G EG V+AVG V+ K GD V+ N G W+
Sbjct: 86 CGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRS-GMWQ 144
Query: 140 TEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQA 199
E +P + + AA L VN TAY +L DF LQPG SV+ + + GVG A
Sbjct: 145 EEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGMA 204
Query: 200 VIQIAAALGLRTI-NVVRDRPDIQKLSDRLKSLGAEHVIT------EEELRRPEMKNFFK 252
+Q+ RT+ NV + LK G H I +E+++ K
Sbjct: 205 AVQLC-----RTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGV-- 257
Query: 253 DMPQPRLALNCVGGKSSTELLRQLARGGTMVTYG 286
+ ++ +GG + + L G +VTYG
Sbjct: 258 -----DIVMDPLGGSDTAKGYNLLKPMGKVVTYG 286
>gi|194239674 crystallin, zeta isoform a [Homo sapiens]
Length = 329
Score = 79.7 bits (195), Expect = 4e-15
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 15/268 (5%)
Query: 43 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPA 102
+RA+ G P + ++ + + V +K+ A +NP + + G Y P LP
Sbjct: 8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 67
Query: 103 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 162
G++ + AVG N + K GD V ++ G + A+ ++ + ++P + + A
Sbjct: 68 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 127
Query: 163 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 222
+G+ TAYR L+ ++ G+SV+ + ++ GVG A QIA A GL+ + + Q
Sbjct: 128 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA-GTEEGQ 186
Query: 223 KLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTM 282
K+ + GA V E+ + + + + + + ++ L L+ GG +
Sbjct: 187 KI---VLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRV 243
Query: 283 VTYGG-----------MAKQPVVASVSL 299
+ G MAK+ + V+L
Sbjct: 244 IVVGSRGTIEINPRDTMAKESSIIGVTL 271
>gi|13236495 crystallin, zeta isoform a [Homo sapiens]
Length = 329
Score = 79.7 bits (195), Expect = 4e-15
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 15/268 (5%)
Query: 43 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPA 102
+RA+ G P + ++ + + V +K+ A +NP + + G Y P LP
Sbjct: 8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 67
Query: 103 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 162
G++ + AVG N + K GD V ++ G + A+ ++ + ++P + + A
Sbjct: 68 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 127
Query: 163 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 222
+G+ TAYR L+ ++ G+SV+ + ++ GVG A QIA A GL+ + + Q
Sbjct: 128 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA-GTEEGQ 186
Query: 223 KLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTM 282
K+ + GA V E+ + + + + + + ++ L L+ GG +
Sbjct: 187 KI---VLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRV 243
Query: 283 VTYGG-----------MAKQPVVASVSL 299
+ G MAK+ + V+L
Sbjct: 244 IVVGSRGTIEINPRDTMAKESSIIGVTL 271
>gi|194239676 crystallin, zeta isoform b [Homo sapiens]
Length = 295
Score = 78.6 bits (192), Expect = 9e-15
Identities = 46/170 (27%), Positives = 85/170 (50%)
Query: 43 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPA 102
+RA+ G P + ++ + + V +K+ A +NP + + G Y P LP
Sbjct: 8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 67
Query: 103 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 162
G++ + AVG N + K GD V ++ G + A+ ++ + ++P + + A
Sbjct: 68 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 127
Query: 163 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTI 212
+G+ TAYR L+ ++ G+SV+ + ++ GVG A QIA A GL+ +
Sbjct: 128 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKIL 177
>gi|24308257 vesicle amine transport protein 1 homolog (T.
californica)-like [Homo sapiens]
Length = 419
Score = 77.4 bits (189), Expect = 2e-14
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 12/268 (4%)
Query: 19 GLLPASGCHGPAASSYSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKML 78
G PA G G + + E +RA+V G K+ L + + ++++++
Sbjct: 21 GKEPAEGGGGDGSHRLGDAQE---MRAVVLAGFGGLNKL-RLFRKAMPEPQDGELKIRVK 76
Query: 79 AAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTW 138
A +N D+ + QGN P+ P V G E V A+G +V G + GD V+ A W
Sbjct: 77 ACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVM-AFVNYNAW 135
Query: 139 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQ 198
E + ++P D+ AA +N TAY ML + L+ G SV+ +++ GVGQ
Sbjct: 136 AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQ 195
Query: 199 AVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPR 258
AV Q+ + + T+ + + D + L + +E++R +
Sbjct: 196 AVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGV-------D 248
Query: 259 LALNCVGGKSSTELLRQLARGGTMVTYG 286
+ L+C+ G ++ + L L GT + YG
Sbjct: 249 IVLDCLCGDNTGKGLSLLKPLGTYILYG 276
>gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo
sapiens]
Length = 375
Score = 62.8 bits (151), Expect = 5e-10
Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 56/247 (22%)
Query: 56 KVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAV 115
K ++ +E+A + +VR+KM+AA I SD +++ GN + LP + G+E V +V
Sbjct: 20 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGN--LVTPLPVILGHEAAGIVESV 77
Query: 116 GSNVTGLKPGDWVIPA-------------------------------------------- 131
G VT +KPGD VIP
Sbjct: 78 GEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKP 137
Query: 132 ---NAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVI 188
G+ T+ V E A+ ++ + PL+ +G T Y + ++ PG S
Sbjct: 138 IHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPG-STC 196
Query: 189 QNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK-LSDRLKSLGAEHVITEEELRRPEM 247
GVG +V+ A G I V DI K + K LGA I ++ ++P +
Sbjct: 197 AVFGLGGVGLSVVMGCKAAGAARIIAV----DINKDKFAKAKELGATECINPQDYKKP-I 251
Query: 248 KNFFKDM 254
+ K+M
Sbjct: 252 QEVLKEM 258
>gi|22538446 tumor protein p53 inducible protein 3 [Homo sapiens]
Length = 332
Score = 61.6 bits (148), Expect = 1e-09
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
Query: 72 DVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTG-LKPGDWVIP 130
+V +K+ A+ +N +D+ QG Y P + G E V +G G K GD +
Sbjct: 29 EVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMA 88
Query: 131 ANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQN 190
G G + V E L+ +P + L AA + TA+++L +Q GD V+ +
Sbjct: 89 LLPGGGQAQYVTV-PEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIH 147
Query: 191 ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNF 250
A SGVG A IQ+ G + + +Q ++++L A +E+ +K
Sbjct: 148 AGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL-GAAAGFNYKKEDFSEATLK-- 203
Query: 251 FKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASV-SLLIFK 303
F L L+C+GG + + LA G V YG M + + S L+FK
Sbjct: 204 FTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFK 257
>gi|22538444 tumor protein p53 inducible protein 3 [Homo sapiens]
Length = 332
Score = 61.6 bits (148), Expect = 1e-09
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
Query: 72 DVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTG-LKPGDWVIP 130
+V +K+ A+ +N +D+ QG Y P + G E V +G G K GD +
Sbjct: 29 EVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMA 88
Query: 131 ANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQN 190
G G + V E L+ +P + L AA + TA+++L +Q GD V+ +
Sbjct: 89 LLPGGGQAQYVTV-PEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIH 147
Query: 191 ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNF 250
A SGVG A IQ+ G + + +Q ++++L A +E+ +K
Sbjct: 148 AGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL-GAAAGFNYKKEDFSEATLK-- 203
Query: 251 FKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASV-SLLIFK 303
F L L+C+GG + + LA G V YG M + + S L+FK
Sbjct: 204 FTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFK 257
>gi|226056130 prostaglandin reductase 1 isoform 2 [Homo sapiens]
Length = 301
Score = 59.3 bits (142), Expect = 5e-09
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 34/296 (11%)
Query: 59 ELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSN 118
ELK EL ++ +V ++ L ++P ++ L E + G + VA+VV N
Sbjct: 23 ELKTAELPPLKNGEVLLEALFLTVDP----YMRVAAKRLKEGDTMMGQQ-VAKVVE-SKN 76
Query: 119 VTGLKPGDWVIPANAGLGTWRTEAVFS----EEALIQVPSDIPLQSA-ATLGVNPCTAYR 173
V P ++ A+ G W T ++ E+ L + P IPL A T+G+ TAY
Sbjct: 77 VA--LPKGTIVLASPG---WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYF 131
Query: 174 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGA 233
L++ ++ G++V+ NA+ VG V QIA G + + V + L+ LG
Sbjct: 132 GLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVA----YLQKLGF 187
Query: 234 EHVITEEELRRPEMKNFFKDMPQPRLALNC----VGGKSSTELLRQLARGGTMV------ 283
+ V + + E + K P +C VGG+ S ++ Q+ + G +
Sbjct: 188 DVVFNYKTVESLE-ETLKKASPD---GYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 243
Query: 284 TYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQ 339
TY P ++I+++L++ F + +W+ D K+L+ + ++ R +
Sbjct: 244 TYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEIKRENE 299
>gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo
sapiens]
Length = 375
Score = 58.5 bits (140), Expect = 9e-09
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 56/247 (22%)
Query: 56 KVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAV 115
K ++++E+A + +VR+KM+A I +D +++ GN + LP + G+E V +V
Sbjct: 20 KPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGN--LVTPLPVILGHEAAGIVESV 77
Query: 116 GSNVTGLKPGDWVIPANA------------------------------------------ 133
G VT +KPGD VIP
Sbjct: 78 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 137
Query: 134 -----GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVI 188
G T+ V E A+ ++ + PL+ +G T Y ++ ++ PG S
Sbjct: 138 IHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG-STC 196
Query: 189 QNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK-LSDRLKSLGAEHVITEEELRRPEM 247
GVG + + A G I V DI K + K LGA I ++ ++P +
Sbjct: 197 AVFGLGGVGLSAVMGCKAAGAARIIAV----DINKDKFAKAKELGATECINPQDYKKP-I 251
Query: 248 KNFFKDM 254
+ K+M
Sbjct: 252 QEVLKEM 258
>gi|226059159 prostaglandin reductase 1 isoform 1 [Homo sapiens]
Length = 329
Score = 57.8 bits (138), Expect = 2e-08
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 59 ELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSN 118
ELK EL ++ +V ++ L ++P ++ L E + G + VA+VV N
Sbjct: 23 ELKTAELPPLKNGEVLLEALFLTVDP----YMRVAAKRLKEGDTMMGQQ-VAKVVE-SKN 76
Query: 119 VTGLKPGDWVIPANAGLGTWRTEAVFS----EEALIQVPSDIPLQSA-ATLGVNPCTAYR 173
V P ++ A+ G W T ++ E+ L + P IPL A T+G+ TAY
Sbjct: 77 VA--LPKGTIVLASPG---WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYF 131
Query: 174 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGA 233
L++ ++ G++V+ NA+ VG V QIA G + + V + L+ LG
Sbjct: 132 GLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVA----YLQKLGF 187
Query: 234 EHVITEEELRRPEMKNFFKDMPQPRLALNC----VGGKSSTELLRQLARGGTMV------ 283
+ V + + E + K P +C VGG+ S ++ Q+ + G +
Sbjct: 188 DVVFNYKTVESLE-ETLKKASPD---GYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 243
Query: 284 TYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELI 328
TY P ++I+++L++ F + +W+ D K+L+
Sbjct: 244 TYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLL 288
>gi|226059133 prostaglandin reductase 1 isoform 1 [Homo sapiens]
Length = 329
Score = 57.8 bits (138), Expect = 2e-08
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 59 ELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSN 118
ELK EL ++ +V ++ L ++P ++ L E + G + VA+VV N
Sbjct: 23 ELKTAELPPLKNGEVLLEALFLTVDP----YMRVAAKRLKEGDTMMGQQ-VAKVVE-SKN 76
Query: 119 VTGLKPGDWVIPANAGLGTWRTEAVFS----EEALIQVPSDIPLQSA-ATLGVNPCTAYR 173
V P ++ A+ G W T ++ E+ L + P IPL A T+G+ TAY
Sbjct: 77 VA--LPKGTIVLASPG---WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYF 131
Query: 174 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGA 233
L++ ++ G++V+ NA+ VG V QIA G + + V + L+ LG
Sbjct: 132 GLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVA----YLQKLGF 187
Query: 234 EHVITEEELRRPEMKNFFKDMPQPRLALNC----VGGKSSTELLRQLARGGTMV------ 283
+ V + + E + K P +C VGG+ S ++ Q+ + G +
Sbjct: 188 DVVFNYKTVESLE-ETLKKASPD---GYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 243
Query: 284 TYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELI 328
TY P ++I+++L++ F + +W+ D K+L+
Sbjct: 244 TYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLL 288
>gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo
sapiens]
Length = 375
Score = 57.8 bits (138), Expect = 2e-08
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 56/247 (22%)
Query: 56 KVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAV 115
K ++ +E+A + +VR+KM+A I +D +++ G + LP + G+E V +V
Sbjct: 20 KPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGT--MVTPLPVILGHEAAGIVESV 77
Query: 116 GSNVTGLKPGDWVIPAN------------------------------------------- 132
G VT +KPGD VIP
Sbjct: 78 GEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKP 137
Query: 133 ----AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVI 188
G+ T+ V E A+ ++ + PL+ +G T Y ++ ++ PG S
Sbjct: 138 IHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG-STC 196
Query: 189 QNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK-LSDRLKSLGAEHVITEEELRRPEM 247
GVG + I A G I V DI K + K LGA I ++ ++P +
Sbjct: 197 AVFGLGGVGLSAIMGCKAAGAARIIAV----DINKDKFAKAKELGATECINPQDYKKP-I 251
Query: 248 KNFFKDM 254
+ K+M
Sbjct: 252 QEVLKEM 258
>gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo
sapiens]
Length = 374
Score = 52.4 bits (124), Expect = 7e-07
Identities = 76/338 (22%), Positives = 125/338 (36%), Gaps = 70/338 (20%)
Query: 39 EPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLP 98
E + +A V G P + E+ E+A + +VR+K++A + +D + G P
Sbjct: 4 EVIKCKAAVAWEAGKPLSIEEI---EVAPPKAHEVRIKIIATAVCHTDAYTLSGAD---P 57
Query: 99 E--LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA------------------------- 131
E P + G+EG V +VG VT LK GD VIP
Sbjct: 58 EGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVT 117
Query: 132 ----------------------NAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPC 169
G T+ V ++ ++ ++ PL LG
Sbjct: 118 QGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIS 177
Query: 170 TAYRMLMDFEQLQPGDSVIQNASNSGVGQAVI---QIAAALGLRTINVVRDRPDIQKLSD 226
T Y ++ +L+PG SV GVG AVI ++A A + +++ +D+
Sbjct: 178 TGYGAAVNTAKLEPG-SVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK------FA 230
Query: 227 RLKSLGAEHVITEEELRRPEMKNFFKDMPQPRL--ALNCVGG-KSSTELLRQLARG-GTM 282
R K GA I ++ +P ++ +M + + C+G K L +G G
Sbjct: 231 RAKEFGATECINPQDFSKP-IQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 289
Query: 283 VTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHS 320
V G A +A+ + +G WK S
Sbjct: 290 VVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVES 327
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 114 AVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYR 173
A G V GL P GL T + S + L VPS+ L+ AA++ V TAY
Sbjct: 1608 ASGKRVMGLVPAK-------GLAT---SVLLSPDFLWDVPSNWTLEEAASVPVVYSTAYY 1657
Query: 174 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVV 215
L+ +++PG++++ ++ + GVGQA I IA +LG R V
Sbjct: 1658 ALVVRGRVRPGETLLIHSGSGGVGQAAIAIALSLGCRVFTTV 1699
>gi|28557745 zinc binding alcohol dehydrogenase domain containing 2
[Homo sapiens]
Length = 377
Score = 48.9 bits (115), Expect = 7e-06
Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 19/254 (7%)
Query: 72 DVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA 131
D+ V+ +N SDIN G Y + P G EG+ +VVA+G + + + A
Sbjct: 64 DLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAV-A 122
Query: 132 NAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 191
G++ V VPS P TL V+ TAY L + L G V+ A
Sbjct: 123 YMAPGSFAEYTVVPASIATPVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTA 180
Query: 192 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 251
+ G GQ +Q++ I + S LKSLG + I + P
Sbjct: 181 AAGGTGQFAMQLSKKAKCHVIGTCSS----DEKSAFLKSLGCDRPINYK--TEPVGTVLK 234
Query: 252 KDMPQ-PRLALNCVGGKSSTELLRQLARGGTMVTYGGMA-------KQPVVASV--SLLI 301
++ P+ + VGG + LA G ++ G ++ PV A + L+
Sbjct: 235 QEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLL 294
Query: 302 FKDLKLRGFWLSQW 315
K ++GF+L+ +
Sbjct: 295 KKSASVQGFFLNHY 308
>gi|71565152 class II alcohol dehydrogenase, pi subunit [Homo
sapiens]
Length = 380
Score = 48.9 bits (115), Expect = 7e-06
Identities = 74/335 (22%), Positives = 123/335 (36%), Gaps = 72/335 (21%)
Query: 53 DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQV 112
+ K + ++ +E+A + +VR++++A + +D +I + L P + G+E V
Sbjct: 17 EAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLA-FPVIVGHEAAGIV 75
Query: 113 VAVGSNVTGLKPGDWVIPANA--------------------------------------- 133
++G VT +KPGD VIP A
Sbjct: 76 ESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSR 135
Query: 134 ------------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQL 181
G T+ V S+ L ++ D L+ LG T Y ++ ++
Sbjct: 136 FTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKV 195
Query: 182 QPGDSVIQNASNSGVG-QAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEE 240
PG S GVG AV+ AA R I + + K K+LGA +
Sbjct: 196 TPG-STCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVK----AKALGATDCLNPR 250
Query: 241 ELRRPEMKNFFK-DMPQPRLALNCVGGKSSTE-LLRQLARGGTMVTYGGMAKQPVVASVS 298
+L +P + + AL+C GG + + L G T+ G+A S
Sbjct: 251 DLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVA----AGSKG 306
Query: 299 LLIFKD-----LKLRGFWLSQWKKDHSPDQFKELI 328
L IF + + G + WK S D +L+
Sbjct: 307 LTIFPEELIIGRTINGTFFGGWK---SVDSIPKLV 338
>gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit
[Homo sapiens]
Length = 386
Score = 48.5 bits (114), Expect = 1e-05
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 60 LKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNV 119
++ +E+A + +VR+K+LA I +D ++I+G + + P + G+E V ++G V
Sbjct: 36 IEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT--MVSKFPVIVGHEATGIVESIGEGV 93
Query: 120 TGLKPGDWVIP 130
T +KPGD VIP
Sbjct: 94 TTVKPGDKVIP 104
>gi|47519420 reticulon 4 interacting protein 1 precursor [Homo
sapiens]
Length = 396
Score = 46.6 bits (109), Expect = 4e-05
Identities = 62/238 (26%), Positives = 94/238 (39%), Gaps = 34/238 (14%)
Query: 71 SDVRVKMLAAPINPSDINMIQGNYGFL---------------PELPAVGGNEGVAQVVAV 115
++V VK+ AA +NP D+NM G YG E P G + V+
Sbjct: 72 NEVIVKVHAASVNPIDVNMRSG-YGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMEC 130
Query: 116 GSNVTGLKPGD--WVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYR 173
G +V KPGD W GT V S + P + AA+L TA+
Sbjct: 131 GLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWS 190
Query: 174 MLMDFEQLQ----PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK 229
+ L G V+ ++ GVG IQ+ A V Q S+ ++
Sbjct: 191 AINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-----QDASELVR 245
Query: 230 SLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSST---ELLRQLARGGTMVT 284
LGA+ VI + + ++ K + L+ VGG + T + L++ + G T VT
Sbjct: 246 KLGADDVI---DYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWS-GATYVT 299
>gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens]
Length = 375
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 35 SASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNY 94
S + + R +A + G P + E+ E+A + +VR+K++A + +++ ++ +
Sbjct: 2 STTGQVIRCKAAILWKPGAPFSIEEV---EVAPPKAKEVRIKVVATGLCGTEMKVLGSKH 58
Query: 95 GFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVI 129
L P + G+EG V ++G V+ +KPGD VI
Sbjct: 59 LDLL-YPTILGHEGAGIVESIGEGVSTVKPGDKVI 92
>gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens]
Length = 368
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 35 SASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNY 94
S + + R +A + G P + E+ E+A + +VR+K++A + +++ ++ +
Sbjct: 2 STTGQVIRCKAAILWKPGAPFSIEEV---EVAPPKAKEVRIKVVATGLCGTEMKVLGSKH 58
Query: 95 GFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVI 129
L P + G+EG V ++G V+ +KPGD VI
Sbjct: 59 LDLL-YPTILGHEGAGIVESIGEGVSTVKPGDKVI 92
>gi|156627571 sorbitol dehydrogenase [Homo sapiens]
Length = 357
Score = 38.5 bits (88), Expect = 0.010
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 35 SASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQ-GN 93
+A+A+P + +V+G GD + L+N + ++V ++M + I SD++ + G
Sbjct: 2 AAAAKPNNLSLVVHGP-GD----LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGR 56
Query: 94 YG-FLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWV 128
G F+ + P V G+E V VGS+V LKPGD V
Sbjct: 57 IGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRV 92
>gi|90669511 crystallin, zeta-like 1 [Homo sapiens]
Length = 349
Score = 33.1 bits (74), Expect = 0.41
Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 105 GNEGVAQVVAVGSNVTGLKPGDWVI---PANAGLGTWRTEAVFSEEALIQVPSDIPLQSA 161
G E V+ VGS V+ +P D V+ P ++ E L+ P + A
Sbjct: 63 GREIAGIVLDVGSKVSFFQPDDEVVGILPLDSEDPGLCEVVRVHEHYLVHKPEKVTWTEA 122
Query: 162 ATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDI 221
A + AY L L PG SV+ S G IQ+A G + I+ D
Sbjct: 123 AGSIRDGVRAYTALHYLSHLSPGKSVLIMDGASAFGTIAIQLAHHRGAKVISTACSLEDK 182
Query: 222 QKL 224
Q L
Sbjct: 183 QCL 185
>gi|110347463 human immunodeficiency virus type I enhancer binding
protein 2 [Homo sapiens]
Length = 2446
Score = 31.2 bits (69), Expect = 1.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 313 SQWKKDHSPDQFKELILTLC-----DLIRRGQLTAPACSQVPLQDYQSALEASMKPFISS 367
S KKD S Q +L+ C D ++ G + + S QDY S +S +PF+ S
Sbjct: 1481 SDIKKDLSRPQKPQLVRQGCASEPKDGLQSGSSSFSSLSPSSSQDYPSVSPSSREPFLPS 1540
Query: 368 KQILT 372
K++L+
Sbjct: 1541 KEMLS 1545
>gi|197927207 crystallin, zeta isoform c [Homo sapiens]
Length = 192
Score = 30.8 bits (68), Expect = 2.1
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 181 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEE 240
++ G+SV+ + ++ GVG A QIA A GL+ + + QK+ + GA V
Sbjct: 9 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTA-GTEEGQKI---VLQNGAHEVFNHR 64
Query: 241 ELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGG-----------MA 289
E+ + + + + + + ++ L L+ GG ++ G MA
Sbjct: 65 EVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEINPRDTMA 124
Query: 290 KQPVVASVSL 299
K+ + V+L
Sbjct: 125 KESSIIGVTL 134
>gi|7705353 three prime repair exonuclease 1 isoform a [Homo
sapiens]
Length = 369
Score = 29.6 bits (65), Expect = 4.6
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 244 RPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFK 303
RPEM P P L + +G + T + GT T G A P + LIF
Sbjct: 15 RPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPP--GPMQTLIFF 72
Query: 304 DLKLRGFWLSQWKKDHSPDQFKELILTLCDL-IRRGQLTAPACSQVP 349
D++ G SQ K + LC L + R L +P SQ P
Sbjct: 73 DMEATGLPFSQPK-----------VTELCLLAVHRCALESPPTSQGP 108
>gi|10190746 retinol dehydrogenase 14 (all-trans and 9-cis) [Homo
sapiens]
Length = 336
Score = 29.6 bits (65), Expect = 4.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 181 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK 229
L G +V+ +NSG+G+A LG R I RDR ++ + +L+
Sbjct: 40 LMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLR 88
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 29.3 bits (64), Expect = 6.0
Identities = 17/80 (21%), Positives = 32/80 (40%)
Query: 19 GLLPASGCHGPAASSYSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKML 78
G+L + C G + A P + + H PA + ++ L+L +GS +
Sbjct: 771 GILGPTACTGESEKHLELLASPLPIPSTFLPHSSTPALHLTVQRLKLPPPQGSSESCTVN 830
Query: 79 AAPINPSDINMIQGNYGFLP 98
P +++ N F+P
Sbjct: 831 IPQQPPGSLSIASPNTAFIP 850
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,271,247
Number of Sequences: 37866
Number of extensions: 629624
Number of successful extensions: 1688
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1640
Number of HSP's gapped (non-prelim): 40
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.