Guide to the Human Genome
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Name: RDH14 Sequence: fasta or formatted (336aa) NCBI GI: 10190746
Description:

retinol dehydrogenase 14 (all-trans and 9-cis)

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         32           3
 C cysteine            1.8          6           1
 D aspartate           3.3         11           2
 E glutamate           7.1         24           3
 F phenylalanine       3.9         13           2
 G glycine             9.2         31           2
 H histidine           1.8          6           1
 I isoleucine          3.9         13           1
 K lysine              3.9         13           1
 L leucine            13.7         46           3
 M methionine          2.4          8           1
 N asparagine          3.9         13           2
 P proline             3.9         13           1
 Q glutamine           2.7          9           1
 R arginine            8.3         28           2
 S serine              6.2         21           2
 T threonine           3.6         12           1
 V valine              8.0         27           3
 W tryptophan          0.9          3           1
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   retinol dehydrogenase 14 (all-trans and 9-cis) [Homo... 
RDH13                 0.399   retinol dehydrogenase 13 isoform 1 
RDH12                 0.385   retinol dehydrogenase 12 
RDH11                 0.364   retinol dehydrogenase 11 
RDH13                 0.336   retinol dehydrogenase 13 isoform 2 
DHRS13                0.331   dehydrogenase/reductase (SDR family) member 13 [Hom...
DHRSX                 0.278   dehydrogenase/reductase (SDR family) X-linked [Homo...
WWOX                  0.262   WW domain-containing oxidoreductase isoform 1 
HSD17B7               0.082   hydroxysteroid (17-beta) dehydrogenase 7 
DHRS12                0.071   dehydrogenase/reductase (SDR family) member 12 isofo...
CBR4                  0.063   carbonic reductase 4 
DHRS12                0.061   dehydrogenase/reductase (SDR family) member 12 isofo...
CBR3                  0.058   carbonyl reductase 3 
DCXR                  0.058   dicarbonyl/L-xylulose reductase 
CBR1                  0.058   carbonyl reductase 1 
RDH10                 0.053   retinol dehydrogenase 10 
HSD17B6               0.053   hydroxysteroid (17-beta) dehydrogenase 6 
DHRS7B                0.053   dehydrogenase/reductase (SDR family) member 7B [Homo...
DHRS7                 0.050   dehydrogenase/reductase (SDR family) member 7 
HSD17B8               0.050   estradiol 17 beta-dehydrogenase 8 
HSD17B11              0.047   estradiol 17-beta-dehydrogenase 11 
HSD17B14              0.046   dehydrogenase/reductase (SDR family) member 10 [Homo...
RDH8                  0.046   retinol dehydrogenase 8 (all-trans) 
HPGD                  0.046   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ...
RDH5                  0.044   retinol dehydrogenase 5 (11-cis and 9-cis) 
HSD17B13              0.044   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
HSD17B4               0.042   hydroxysteroid (17-beta) dehydrogenase 4 
DHRS4                 0.042   peroxisomal short-chain alcohol dehydrogenase 
DHRS11                0.042   short-chain dehydrogenase/reductase 
WWOX                  0.041   WW domain-containing oxidoreductase isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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