| Name: TARDBP | Sequence: fasta or formatted (414aa) | NCBI GI: 6678271 | |
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Description: TAR DNA binding protein
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.3 26 3 C cysteine 1.4 6 1 D aspartate 5.3 22 2 E glutamate 5.3 22 1 F phenylalanine 5.3 22 2 G glycine 13.3 55 3 H histidine 1.2 5 1 I isoleucine 3.4 14 2 K lysine 4.8 20 2 L leucine 5.1 21 2 M methionine 4.3 18 2 N asparagine 6.8 28 2 P proline 3.9 16 1 Q glutamine 5.8 24 2 R arginine 4.8 20 1 S serine 9.9 41 2 T threonine 3.6 15 2 V valine 6.0 25 2 W tryptophan 1.4 6 1 Y tyrosine 1.9 8 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 TAR DNA binding protein LOC100132919 0.204 PREDICTED: similar to hCG1642312 LOC100132919 0.204 PREDICTED: similar to hCG1642312 LOC100132919 0.204 PREDICTED: similar to hCG1642312 HNRNPA1 0.120 heterogeneous nuclear ribonucleoprotein A1 isoform b... HNRNPAB 0.118 heterogeneous nuclear ribonucleoprotein A/B isoform ... HNRNPA3 0.118 heterogeneous nuclear ribonucleoprotein A3 HNRPDL 0.114 heterogeneous nuclear ribonucleoprotein D-like [Homo... HNRNPA1 0.114 heterogeneous nuclear ribonucleoprotein A1 isoform a ... HNRNPD 0.112 heterogeneous nuclear ribonucleoprotein D isoform a ... HNRNPAB 0.112 heterogeneous nuclear ribonucleoprotein A/B isoform ... HNRNPD 0.109 heterogeneous nuclear ribonucleoprotein D isoform b ... HNRNPA1L2 0.109 heterogeneous nuclear ribonucleoprotein A1-like [Hom... HNRNPA1L2 0.109 heterogeneous nuclear ribonucleoprotein A1-like [Hom... HNRNPD 0.108 heterogeneous nuclear ribonucleoprotein D isoform c ... HNRNPA2B1 0.108 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... HNRNPD 0.106 heterogeneous nuclear ribonucleoprotein D isoform d ... HNRNPA2B1 0.106 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... LOC120364 0.097 PREDICTED: similar to heterogeneous nuclear ribonucl... LOC120364 0.097 PREDICTED: similar to heterogeneous nuclear ribonucl... LOC120364 0.095 PREDICTED: similar to heterogeneous nuclear ribonuc... HNRNPA0 0.086 heterogeneous nuclear ribonucleoprotein A0 MSI1 0.085 musashi 1 DAZAP1 0.084 DAZ associated protein 1 isoform a DAZAP1 0.084 DAZ associated protein 1 isoform b MSI2 0.081 musashi 2 isoform b MSI2 0.080 musashi 2 isoform a NCL 0.063 nucleolin CUGBP1 0.053 CUG triplet repeat, RNA-binding protein 1 isoform 1 [... CUGBP1 0.052 CUG triplet repeat, RNA-binding protein 1 isoform 2 ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
