Guide to the Human Genome
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Name: FLYWCH1 Sequence: fasta or formatted (703aa) NCBI GI: 62953136
Description:

FLYWCH-type zinc finger 1 isoform b

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [715aa] FLYWCH-type zinc finger 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         49           2
 C cysteine            3.0         21           1
 D aspartate           3.8         27           1
 E glutamate           9.2         65           4
 F phenylalanine       2.6         18           1
 G glycine             9.5         67           2
 H histidine           2.7         19           1
 I isoleucine          1.6         11           1
 K lysine              4.7         33           2
 L leucine            10.7         75           2
 M methionine          2.1         15           1
 N asparagine          0.3          2           1
 P proline             8.7         61           2
 Q glutamine           6.4         45           2
 R arginine           10.1         71           2
 S serine              5.0         35           1
 T threonine           4.3         30           2
 V valine              5.3         37           2
 W tryptophan          1.0          7           1
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FLYWCH-type zinc finger 1 isoform b 
FLYWCH1               1.000   FLYWCH-type zinc finger 1 isoform a 
FLYWCH2               0.072   FLYWCH family member 2 
FLYWCH2               0.072   FLYWCH family member 2 
FLYWCH2               0.072   FLYWCH family member 2 
HOMEZ                 0.009   homeodomain leucine zipper protein 
RP1L1                 0.008   retinitis pigmentosa 1-like 1 
KDM5C                 0.008   jumonji, AT rich interactive domain 1C isoform 1 [H...
BMP6                  0.008   bone morphogenetic protein 6 preproprotein 
ANKRD43               0.008   ankyrin repeat domain 43 
AKAP8L                0.007   A kinase (PRKA) anchor protein 8-like 
C19orf61              0.007   hypothetical protein LOC56006 
MAVS                  0.007   virus-induced signaling adapter 
KIF26A                0.007   kinesin family member 26A 
ZC3H4                 0.006   zinc finger CCCH-type containing 4 
SMARCC2               0.006   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.006   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.006   SWI/SNF-related matrix-associated actin-dependent r...
COL28A1               0.006   collagen, type XXVIII precursor 
LOC65998              0.006   hypothetical protein LOC65998 
C21orf66              0.006   GC-rich sequence DNA-binding factor candidate isofor...
C21orf66              0.006   GC-rich sequence DNA-binding factor candidate isofor...
COL7A1                0.006   alpha 1 type VII collagen precursor 
ANKRD57               0.006   ankyrin repeat domain 57 
ADAM15                0.006   a disintegrin and metalloproteinase domain 15 isofor...
SYN1                  0.006   synapsin I isoform Ia 
SYN1                  0.006   synapsin I isoform Ib 
SYNJ2                 0.006   synaptojanin 2 
PRB2                  0.006   proline-rich protein BstNI subfamily 2 
LOC100290717          0.005   PREDICTED: hypothetical protein XP_002347797 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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