Guide to the Human Genome
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Name: BMP6 Sequence: fasta or formatted (513aa) NCBI GI: 4502425
Description:

bone morphogenetic protein 6 preproprotein

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         42           7
 C cysteine            2.3         12           2
 D aspartate           4.7         24           2
 E glutamate           5.1         26           2
 F phenylalanine       3.5         18           2
 G glycine             6.6         34           2
 H histidine           3.3         17           2
 I isoleucine          2.1         11           2
 K lysine              3.7         19           2
 L leucine             9.4         48           2
 M methionine          2.1         11           1
 N asparagine          3.9         20           1
 P proline             8.2         42           3
 Q glutamine           7.4         38           6
 R arginine            6.8         35           3
 S serine              8.8         45           3
 T threonine           3.3         17           2
 V valine              6.0         31           2
 W tryptophan          1.9         10           3
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bone morphogenetic protein 6 preproprotein 
BMP7                  0.491   bone morphogenetic protein 7 precursor 
BMP5                  0.476   bone morphogenetic protein 5 preproprotein 
BMP8B                 0.341   bone morphogenetic protein 8B preproprotein 
BMP8A                 0.341   bone morphogenetic protein 8A 
BMP2                  0.155   bone morphogenetic protein 2 preproprotein 
BMP4                  0.154   bone morphogenetic protein 4 preproprotein 
BMP4                  0.154   bone morphogenetic protein 4 preproprotein 
BMP4                  0.154   bone morphogenetic protein 4 preproprotein 
GDF3                  0.111   growth differentiation factor 3 precursor 
GDF5                  0.108   growth differentiation factor 5 preproprotein 
GDF6                  0.103   growth differentiation factor 6 precursor 
GDF7                  0.100   growth differentiation factor 7 preproprotein 
GDF2                  0.100   growth differentiation factor 2 
BMP10                 0.095   bone morphogenetic protein 10 preproprotein 
BMP3                  0.091   bone morphogenetic protein 3 preproprotein 
GDF1                  0.091   growth differentiation factor 1 
GDF10                 0.080   growth differentiation factor 10 precursor 
BMP15                 0.078   bone morphogenetic protein 15 precursor 
INHBA                 0.075   inhibin beta A precursor 
TGFB3                 0.074   transforming growth factor, beta 3 
MSTN                  0.072   myostatin 
NODAL                 0.072   nodal precursor 
GDF11                 0.069   growth differentiation factor 11 precursor 
INHBE                 0.067   activin beta E 
TGFB2                 0.065   transforming growth factor, beta 2 isoform 1 
TGFB2                 0.065   transforming growth factor, beta 2 isoform 2 
INHBB                 0.062   inhibin beta B subunit preproprotein 
GDF9                  0.061   growth differentiation factor 9 precursor 
INHBC                 0.055   inhibin beta C chain preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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