C6orf221 34245

Name: C6orf221	Sequence: fasta or formatted (217aa)		NCBI GI: 62821796
Description: hypothetical protein LOC154288		Referenced in: Stem Cells and Early Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 18 2 C cysteine 0.0 0 0 D aspartate 3.2 7 1 E glutamate 8.8 19 1 F phenylalanine 3.2 7 1 G glycine 6.9 15 2 H histidine 2.3 5 1 I isoleucine 3.7 8 1 K lysine 5.1 11 1 L leucine 6.9 15 1 M methionine 2.8 6 1 N asparagine 2.3 5 1 P proline 5.5 12 1 Q glutamine 9.2 20 2 R arginine 8.8 19 2 S serine 6.5 14 2 T threonine 5.1 11 1 V valine 9.7 21 2 W tryptophan 0.9 2 1 Y tyrosine 0.9 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC154288 OOEP 0.095 oocyte expressed protein homolog DPPA5 0.087 developmental pluripotency associated 5 PNN 0.027 pinin, desmosome associated protein KANK3 0.022 ankyrin repeat domain 47 LMX1A 0.020 LIM homeobox transcription factor 1, alpha isoform a... AZI1 0.017 5-azacytidine induced 1 isoform b AZI1 0.017 5-azacytidine induced 1 isoform a MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... PHKA1 0.012 phosphorylase kinase, alpha 1 (muscle) isoform 2 [H... POL3S 0.012 polyserase 3 ZNF821 0.012 zinc finger protein 821 CROCC 0.012 ciliary rootlet coiled-coil PCF11 0.012 pre-mRNA cleavage complex II protein Pcf11 LIPE 0.010 hormone-sensitive lipase KHSRP 0.010 KH-type splicing regulatory protein NUDC 0.010 nuclear distribution gene C homolog C3orf35 0.010 AP20 region protein isoform B TCHHL1 0.010 trichohyalin-like 1 DDX43 0.007 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 FAM83D 0.007 hypothetical protein LOC81610 VARS 0.007 valyl-tRNA synthetase SLC35B2 0.007 solute carrier family 35, member B2 LOC392556 0.007 PREDICTED: similar to melanoma antigen family A, 5 ... LOC392556 0.007 PREDICTED: similar to melanoma antigen family A, 5 ... MKL2 0.007 megakaryoblastic leukemia 2 protein RCSD1 0.007 RCSD domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.