Name: LOC392556 | Sequence: fasta or formatted (127aa) | NCBI GI: 239752446 | |
Description: PREDICTED: similar to melanoma antigen family A, 5
| Not currently referenced in the text | ||
Other entries for this name:
alt mRNA {127aa} PREDICTED: similar to melanoma antigen family A, 5 | |||
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.7 11 2 C cysteine 0.8 1 1 D aspartate 3.9 5 1 E glutamate 12.6 16 2 F phenylalanine 2.4 3 1 G glycine 8.7 11 1 H histidine 1.6 2 1 I isoleucine 0.8 1 1 K lysine 2.4 3 1 L leucine 11.0 14 2 M methionine 0.8 1 1 N asparagine 2.4 3 1 P proline 9.4 12 1 Q glutamine 7.1 9 1 R arginine 0.8 1 1 S serine 12.6 16 3 T threonine 7.9 10 2 V valine 3.9 5 1 W tryptophan 0.8 1 1 Y tyrosine 1.6 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to melanoma antigen family A, 5 ... LOC392556 1.000 PREDICTED: similar to melanoma antigen family A, 5 ... MAGEA4 0.541 melanoma antigen family A, 4 MAGEA4 0.541 melanoma antigen family A, 4 MAGEA4 0.541 melanoma antigen family A, 4 MAGEA4 0.541 melanoma antigen family A, 4 MAGEA12 0.528 melanoma antigen family A, 12 MAGEA5 0.519 melanoma antigen family A, 5 MAGEA8 0.502 melanoma antigen family A, 8 MAGEA3 0.498 melanoma antigen family A, 3 MAGEA6 0.494 melanoma antigen family A, 6 MAGEA6 0.494 melanoma antigen family A, 6 MAGEA11 0.476 melanoma antigen family A, 11 isoform b MAGEA11 0.476 melanoma antigen family A, 11 isoform a MAGEA2 0.472 melanoma antigen family A, 2 MAGEA2 0.472 melanoma antigen family A, 2 MAGEA2 0.472 melanoma antigen family A, 2 MAGEA2B 0.472 melanoma antigen family A, 2B MAGEA9B 0.437 melanoma antigen family A, 9 -like MAGEA9 0.437 melanoma antigen family A, 9 MAGEA1 0.377 melanoma antigen family A, 1 MAGEA10 0.234 melanoma antigen family A, 10 MAGEA10 0.234 melanoma antigen family A, 10 MAGEB16 0.182 melanoma antigen family B, 16 MAGEB2 0.121 melanoma antigen family B, 2 MAGEC3 0.117 melanoma antigen family C, 3 isoform 1 MAGEB17 0.117 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.117 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.117 PREDICTED: melanoma antigen family B, 17 MAGEC3 0.113 melanoma antigen family C, 3 isoform 2Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.