Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: POL3S Sequence: fasta or formatted (553aa) NCBI GI: 87196600
Description:

polyserase 3

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         65           3
 C cysteine            4.2         23           1
 D aspartate           3.1         17           1
 E glutamate           5.6         31           2
 F phenylalanine       1.8         10           1
 G glycine            11.0         61           2
 H histidine           3.4         19           2
 I isoleucine          2.0         11           2
 K lysine              0.7          4           1
 L leucine            11.4         63           4
 M methionine          1.3          7           1
 N asparagine          1.6          9           1
 P proline             9.6         53           2
 Q glutamine           5.8         32           1
 R arginine            4.7         26           2
 S serine              7.2         40           2
 T threonine           4.7         26           2
 V valine              5.4         30           2
 W tryptophan          3.3         18           1
 Y tyrosine            1.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polyserase 3 
PRSS36                0.255   protease, serine, 36 
TMPRSS9               0.161   transmembrane protease, serine 9 
PRSS27                0.128   marapsin 
PRSS33                0.128   protease, serine, 33 
TMPRSS6               0.124   transmembrane protease, serine 6 
PRSS8                 0.122   prostasin preproprotein 
PRSS22                0.112   protease, serine, 22 
TPSG1                 0.102   transmembrane tryptase preproprotein 
TMPRSS3               0.099   transmembrane protease, serine 3 isoform 1 
ST14                  0.098   matriptase 
TMPRSS11E             0.096   transmembrane protease, serine 11E 
TMPRSS11E2            0.096   transmembrane protease, serine 11E2 
TESSP1                0.095   testis-specific serine protease 1 
HPN                   0.094   hepsin 
HPN                   0.094   hepsin 
TMPRSS5               0.094   transmembrane protease, serine 5 
PLG                   0.093   plasminogen 
PRSS21                0.092   testisin isoform 1 
PRSS21                0.092   testisin isoform 2 
TMPRSS13              0.092   transmembrane protease, serine 13 
OVCH1                 0.091   ovochymase 1 
KLKB1                 0.089   plasma kallikrein B1 precursor 
UNQ9391               0.087   hypothetical protein LOC203074 
MPN2                  0.087   marapsin 2 
F11                   0.086   coagulation factor XI precursor 
LPA                   0.086   lipoprotein Lp(a) precursor 
TMPRSS2               0.085   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.085   transmembrane protease, serine 2 isoform 2 
TMPRSS11F             0.085   transmembrane protease, serine 11F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press