Guide to the Human Genome
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Name: OOEP Sequence: fasta or formatted (149aa) NCBI GI: 122937452
Description:

oocyte expressed protein homolog

Referenced in:

Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         14           2
 C cysteine            0.7          1           1
 D aspartate           6.0          9           2
 E glutamate           7.4         11           1
 F phenylalanine       3.4          5           1
 G glycine             3.4          5           1
 H histidine           4.0          6           1
 I isoleucine          4.0          6           2
 K lysine              4.0          6           1
 L leucine            11.4         17           2
 M methionine          2.7          4           1
 N asparagine          2.0          3           1
 P proline             9.4         14           3
 Q glutamine           5.4          8           1
 R arginine            8.7         13           2
 S serine              4.7          7           1
 T threonine           2.7          4           1
 V valine              6.7         10           1
 W tryptophan          3.4          5           2
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oocyte expressed protein homolog 
DPPA5                 0.140   developmental pluripotency associated 5 
C6orf221              0.133   hypothetical protein LOC154288 
LOC100129128          0.042   hypothetical protein LOC100129128 
KHDC1                 0.039   KH homology domain containing 1 
TMEM131               0.025   RW1 protein 
ITCH                  0.014   itchy homolog E3 ubiquitin protein ligase 
KDM4B                 0.011   jumonji domain containing 2B 
MAP7                  0.007   microtubule-associated protein 7 
MDN1                  0.007   MDN1, midasin homolog 
KCNH3                 0.007   potassium voltage-gated channel, subfamily H (eag-re...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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