Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 61835148

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|61835148 fragile X mental retardation-related protein 1
isoform a [Homo sapiens]
         (621 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|61835148 fragile X mental retardation-related protein 1 isofo...  1237   0.0  
gi|61835164 fragile X mental retardation-related protein 1 isofo...  1071   0.0  
gi|61835172 fragile X mental retardation-related protein 1 isofo...  1059   0.0  
gi|4758410 fragile X mental retardation syndrome related protein...   734   0.0  
gi|4503765 fragile X mental retardation 1 [Homo sapiens]              508   e-144
gi|145312259 tudor and KH domain containing isoform a [Homo sapi...    44   3e-04
gi|145312270 tudor and KH domain containing isoform a [Homo sapi...    44   3e-04
gi|145312256 tudor and KH domain containing isoform a [Homo sapi...    44   3e-04
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                  43   0.001
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]         43   0.001
gi|17402900 far upstream element-binding protein [Homo sapiens]        42   0.002
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]    40   0.006
gi|100816392 far upstream element (FUSE) binding protein 3 [Homo...    40   0.006
gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a ...    40   0.008
gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a ...    40   0.008
gi|239048862 checkpoint with forkhead and ring finger domains is...    39   0.011
gi|239048792 checkpoint with forkhead and ring finger domains is...    39   0.011
gi|52426743 cisplatin resistance-associated overexpressed protei...    39   0.011
gi|19923485 cisplatin resistance-associated overexpressed protei...    39   0.011
gi|60097902 filaggrin [Homo sapiens]                                   39   0.019
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...    39   0.019
gi|7657138 golgi integral membrane protein 4 [Homo sapiens]            38   0.024
gi|4504733 insulin receptor substrate 4 [Homo sapiens]                 38   0.032
gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo ...    38   0.032
gi|194097341 period 1 [Homo sapiens]                                   37   0.041
gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b ...    37   0.054
gi|217330641 IWS1 homolog [Homo sapiens]                               37   0.054
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s...    37   0.054
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo...    37   0.071
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]    37   0.071

>gi|61835148 fragile X mental retardation-related protein 1 isoform
           a [Homo sapiens]
          Length = 621

 Score = 1237 bits (3201), Expect = 0.0
 Identities = 621/621 (100%), Positives = 621/621 (100%)

Query: 1   MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS 60
           MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
Sbjct: 1   MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS 60

Query: 61  EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT 120
           EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
Sbjct: 61  EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT 120

Query: 121 VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR 180
           VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
Sbjct: 121 VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR 180

Query: 181 VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN 240
           VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
Sbjct: 181 VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN 240

Query: 241 IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN 300
           IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
Sbjct: 241 IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN 300

Query: 301 GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE 360
           GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
Sbjct: 301 GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE 360

Query: 361 VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS 420
           VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS
Sbjct: 361 VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS 420

Query: 421 DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL 480
           DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL
Sbjct: 421 DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL 480

Query: 481 DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY 540
           DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY
Sbjct: 481 DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY 540

Query: 541 ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGE 600
           ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGE
Sbjct: 541 ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGE 600

Query: 601 EKINTLKEENTQEAAVLNGVS 621
           EKINTLKEENTQEAAVLNGVS
Sbjct: 601 EKINTLKEENTQEAAVLNGVS 621


>gi|61835164 fragile X mental retardation-related protein 1 isoform
           b [Homo sapiens]
          Length = 539

 Score = 1071 bits (2769), Expect = 0.0
 Identities = 534/534 (100%), Positives = 534/534 (100%)

Query: 1   MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS 60
           MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
Sbjct: 1   MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS 60

Query: 61  EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT 120
           EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
Sbjct: 61  EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT 120

Query: 121 VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR 180
           VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
Sbjct: 121 VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR 180

Query: 181 VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN 240
           VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
Sbjct: 181 VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN 240

Query: 241 IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN 300
           IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
Sbjct: 241 IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN 300

Query: 301 GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE 360
           GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
Sbjct: 301 GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE 360

Query: 361 VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS 420
           VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS
Sbjct: 361 VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS 420

Query: 421 DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL 480
           DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL
Sbjct: 421 DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL 480

Query: 481 DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGL 534
           DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGL
Sbjct: 481 DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGL 534


>gi|61835172 fragile X mental retardation-related protein 1 isoform
           c [Homo sapiens]
          Length = 536

 Score = 1059 bits (2739), Expect = 0.0
 Identities = 536/536 (100%), Positives = 536/536 (100%)

Query: 86  MMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANEN 145
           MMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANEN
Sbjct: 1   MMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANEN 60

Query: 146 AHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEA 205
           AHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEA
Sbjct: 61  AHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEA 120

Query: 206 TKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIY 265
           TKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIY
Sbjct: 121 TKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIY 180

Query: 266 GESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENK 325
           GESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENK
Sbjct: 181 GESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENK 240

Query: 326 LPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYSG 385
           LPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYSG
Sbjct: 241 LPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYSG 300

Query: 386 RGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGR 445
           RGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGR
Sbjct: 301 RGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGR 360

Query: 446 GRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRR 505
           GRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRR
Sbjct: 361 GRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRR 420

Query: 506 SRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEM 565
           SRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEM
Sbjct: 421 SRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEM 480

Query: 566 AKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAAVLNGVS 621
           AKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAAVLNGVS
Sbjct: 481 AKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAAVLNGVS 536


>gi|4758410 fragile X mental retardation syndrome related protein 2
           [Homo sapiens]
          Length = 673

 Score =  734 bits (1896), Expect = 0.0
 Identities = 409/696 (58%), Positives = 478/696 (68%), Gaps = 114/696 (16%)

Query: 4   LTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGD 63
           L VEVRGSNGAFYKGF+KDVHEDS+T+ FENNWQ ERQ+PF +VRLPPP D  KEI+EGD
Sbjct: 14  LPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPADYNKEITEGD 73

Query: 64  EVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKK 123
           EVEVYSRAN+QEPCGWWLA+VRMMKG+FYVIEYAACDATYNEIVT ERLRPVN N    K
Sbjct: 74  EVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATK 133

Query: 124 NTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNI 183
            +FFK T+ VPEDLREAC+NEN HK+FKKA+GA  IF +   ++L ILS +EA VKR ++
Sbjct: 134 GSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNITNSELFILSTTEAPVKRASL 193

Query: 184 LSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQ 243
           L DMH RS+RTKL+LMSRNEEATKHLE +KQLAAAF EEF VREDLMGLAIGTHG+NIQQ
Sbjct: 194 LGDMHFRSLRTKLLLMSRNEEATKHLETSKQLAAAFQEEFTVREDLMGLAIGTHGANIQQ 253

Query: 244 ARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKV 303
           ARKVPGVTAIEL E+T TFRIYGE+ +A ++AR +LEF ED +QVPRNLVGKVIGKNGKV
Sbjct: 254 ARKVPGVTAIELGEETCTFRIYGETPEACRQARSYLEFSEDSVQVPRNLVGKVIGKNGKV 313

Query: 304 IQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQ 363
           IQEIVDKSGVVRVR+EGDN+ K PRE+GMVPF+FVGT+E+I N Q LLEYH++YL+EVEQ
Sbjct: 314 IQEIVDKSGVVRVRVEGDNDKKNPREEGMVPFIFVGTRENISNAQALLEYHLSYLQEVEQ 373

Query: 364 LRMERLQIDEQLRQIG------------------------------------SRSYSGRG 387
           LR+ERLQIDEQLRQIG                                      SY GRG
Sbjct: 374 LRLERLQIDEQLRQIGLGFRPPGSGRGSGGSDKAGYSTDESSSSSLHATRTYGGSYGGRG 433

Query: 388 RGRR--GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRD-SRHQRDSRRRPGG 444
           RGRR  GP     YG +S++S  SETESE+++E    + AG  DRD      +SRRRP  
Sbjct: 434 RGRRTGGP----AYGPSSDVSTASETESEKREEP---NRAGPGDRDPPTRGEESRRRP-- 484

Query: 445 RGRSVSGGRGRGGP-------RGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESH 497
                +GGRGRG P       R   SSISSVLKDPDSNPYSLLD +E +   D++  E  
Sbjct: 485 -----TGGRGRGPPPAPRPTSRYNSSSISSVLKDPDSNPYSLLDTSEPEPPVDSEPGEPP 539

Query: 498 HSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGL----------------------- 534
            ++ RRRRSRRRRTDED  +MDG  ESD  ++ ENGL                       
Sbjct: 540 PASARRRRSRRRRTDEDRTVMDGGLESDGPNMTENGLEDESRPQRRNRSRRRRNRGNRTD 599

Query: 535 ---------VTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTS 585
                    VTVADYISRAESQSRQ                   +E   PSE +++G   
Sbjct: 600 GSISGDRQPVTVADYISRAESQSRQ----------------SAPLERTKPSEDSLSG--- 640

Query: 586 ASGDDISKLQRTPGEEKINTLKEENTQEAAVLNGVS 621
             GD +SKL + P E   N       +  +++NGVS
Sbjct: 641 QKGDSVSKLPKGPSE---NGELSAPLELGSMVNGVS 673


>gi|4503765 fragile X mental retardation 1 [Homo sapiens]
          Length = 632

 Score =  508 bits (1307), Expect = e-144
 Identities = 247/334 (73%), Positives = 283/334 (84%)

Query: 1   MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS 60
           M EL VEVRGSNGAFYK F+KDVHEDS+TV FENNWQP+RQ+PF++VR PPP    K+I+
Sbjct: 1   MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDIN 60

Query: 61  EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT 120
           E DEVEVYSRAN++EPC WWLAKVRM+KGEFYVIEYAACDATYNEIVT ERLR VN NK 
Sbjct: 61  ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP 120

Query: 121 VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR 180
             K+TF K  +DVPEDLR+ CA E AHKDFKKAVGA  + Y PE  QL+ILS +E T KR
Sbjct: 121 ATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR 180

Query: 181 VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN 240
            ++L DMH RS+RTKL L+ RNEEA+K LE ++QLA+ FHE+F+VREDLMGLAIGTHG+N
Sbjct: 181 AHMLIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN 240

Query: 241 IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN 300
           IQQARKVPGVTAI+LDEDT TF IYGE  DAVKKAR FLEF ED IQVPRNLVGKVIGKN
Sbjct: 241 IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN 300

Query: 301 GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVP 334
           GK+IQEIVDKSGVVRVRIE +NE  +P+E+ ++P
Sbjct: 301 GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMP 334



 Score =  162 bits (409), Expect = 1e-39
 Identities = 132/350 (37%), Positives = 166/350 (47%), Gaps = 74/350 (21%)

Query: 219 FHEEFV-VREDLMGLAIGTHGSNIQQARKVPGVTAIELDED------------------T 259
           F E+ + V  +L+G  IG +G  IQ+     GV  + ++ +                  +
Sbjct: 281 FAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPS 340

Query: 260 GTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIE 319
              R+ G +A   KK     E    F Q            N   +Q ++  S VV     
Sbjct: 341 NNSRV-GPNAPEEKKHLDIKENSTHFSQ-----------PNSTKVQRVLVASSVVA---- 384

Query: 320 GDNEN-KLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQI 378
           G+++  +L    GMVPFVFVGTK+SI N  VLL+YH+ YLKEV+QLR+ERLQIDEQLRQI
Sbjct: 385 GESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQLRQI 444

Query: 379 ---------------------------GSRSYSGRGRGRRGPNYTSGYGTNSELSNPSET 411
                                      GSR Y  RG GRRGP YTS  GTNSE SN SET
Sbjct: 445 GASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTS--GTNSEASNASET 502

Query: 412 ESERKDELSDWSLA-GEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLK 470
           ES+ +DELSDWSLA  E++R+S  +R   RR GG GR   GGRGRGG   G    S    
Sbjct: 503 ESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG-QGGRGRGGGFKGNDDHSRTDN 561

Query: 471 DPDSNPYSLLDNTESDQ---TADTDASESHHS---TNRRRRSRRRRTDED 514
            P  NP      T         D +   S H+    N      R RT +D
Sbjct: 562 RP-RNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKD 610


>gi|145312259 tudor and KH domain containing isoform a [Homo
           sapiens]
          Length = 561

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 222 EFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVK--KARGFL 279
           E  V ++ + L IG  G+NI+Q RK  G       ED G  R+   S   V+  KA+  +
Sbjct: 56  EMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAI 115

Query: 280 EF-------VEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKL 326
                    V + + VP+  VG++IG+ G+ I+ I   SG  ++  + ++E  L
Sbjct: 116 HQILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASG-AKITCDKESEGTL 168


>gi|145312270 tudor and KH domain containing isoform a [Homo
           sapiens]
          Length = 561

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 222 EFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVK--KARGFL 279
           E  V ++ + L IG  G+NI+Q RK  G       ED G  R+   S   V+  KA+  +
Sbjct: 56  EMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAI 115

Query: 280 EF-------VEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKL 326
                    V + + VP+  VG++IG+ G+ I+ I   SG  ++  + ++E  L
Sbjct: 116 HQILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASG-AKITCDKESEGTL 168


>gi|145312256 tudor and KH domain containing isoform a [Homo
           sapiens]
          Length = 561

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 222 EFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVK--KARGFL 279
           E  V ++ + L IG  G+NI+Q RK  G       ED G  R+   S   V+  KA+  +
Sbjct: 56  EMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAI 115

Query: 280 EF-------VEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKL 326
                    V + + VP+  VG++IG+ G+ I+ I   SG  ++  + ++E  L
Sbjct: 116 HQILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASG-AKITCDKESEGTL 168


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 18/184 (9%)

Query: 402 NSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGR-----------SVS 450
           + +  N  +  ++ K        +   +RDS+H R+  +R   R +             S
Sbjct: 445 DDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQS 504

Query: 451 GGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTA-----DTDASESHHSTNRRRR 505
             +G+   R  +S   S   +  SN +    + E D+ A     + D ++  HS N R R
Sbjct: 505 DSKGKDQER-SRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTR 563

Query: 506 SRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNL-PRETLAKNKKE 564
            R R  D    +     + D +   E       +Y  R  S+SR+R   P  + +K+++ 
Sbjct: 564 ERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR 623

Query: 565 MAKD 568
             +D
Sbjct: 624 RRRD 627


>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
          Length = 1303

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 43/135 (31%), Positives = 57/135 (42%), Gaps = 33/135 (24%)

Query: 357 YLKEVEQLRMERLQIDEQLRQIGSRS----YSGRG-----RGRRGPNYTSGYGTNSELSN 407
           + KE+ Q R  +   +   R  GSR     Y GRG     RGR     + G G  S   +
Sbjct: 220 FTKELNQYRRAK---EGSSRGRGSRGRGRGYRGRGSRGGSRGRGMGRGSRGRGRGSMGGD 276

Query: 408 PSETESERKDELSDWSLA----GEDDRDS--------RHQRDSRRR---------PGGRG 446
             E E +  +E  D+  +    G+DD D         R  +DSR R           GRG
Sbjct: 277 HPEDEEDFYEEEMDYGESEEPMGDDDYDEYSKELNQYRRSKDSRGRGLSRGRGRGSRGRG 336

Query: 447 RSVSGGRGRGGPRGG 461
           + +  GRGRGG RGG
Sbjct: 337 KGMGRGRGRGGSRGG 351



 Score = 32.7 bits (73), Expect = 1.0
 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 12/113 (10%)

Query: 410 ETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRG--------- 460
           E E   K++  D++      R ++      R   GRGR   G   RGG RG         
Sbjct: 208 EEEDMGKEDYDDFTKELNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSRGRGMGRGSRG 267

Query: 461 -GKSSISSVLKDPDSNPY-SLLDNTESDQ-TADTDASESHHSTNRRRRSRRRR 510
            G+ S+     + + + Y   +D  ES++   D D  E     N+ RRS+  R
Sbjct: 268 RGRGSMGGDHPEDEEDFYEEEMDYGESEEPMGDDDYDEYSKELNQYRRSKDSR 320


>gi|17402900 far upstream element-binding protein [Homo sapiens]
          Length = 644

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 48/205 (23%)

Query: 221 EEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDE---DTGT---FRIYGES------ 268
           +E ++     GL IG  G  I+Q ++  GV  + + +   +TG     RI G+       
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247

Query: 269 ----ADAVKKARGFLEFVEDF-----------IQVPRNLVGKVIGKNGKVIQEIVDKSGV 313
                + ++   GF E   ++           + +PR  VG VIG+NG++I++I + +G 
Sbjct: 248 KEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAG- 306

Query: 314 VRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDE 373
           VR++ + D        DG  P             Q   E     L+ V            
Sbjct: 307 VRIQFKPD--------DGTTPERIAQITGPPDRCQHAAEIITDLLRSV------------ 346

Query: 374 QLRQIGSRSYSGRGRGRRGPNYTSG 398
           Q    G     GRGRGR   N+  G
Sbjct: 347 QAGNPGGPGPGGRGRGRGQGNWNMG 371



 Score = 37.7 bits (86), Expect = 0.032
 Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 24/135 (17%)

Query: 213 KQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFR----IYGES 268
           +Q  +   EE+ V + ++G  IG  G  I + ++  G   I++  D+G       +   +
Sbjct: 95  QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCK-IQIAPDSGGLPERSCMLTGT 153

Query: 269 ADAVKKARGFLEFVEDF-------------------IQVPRNLVGKVIGKNGKVIQEIVD 309
            ++V+ A+  L+ + +                    I +P +  G VIGK G+ I+++ +
Sbjct: 154 PESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQE 213

Query: 310 KSGVVRVRIEGDNEN 324
           ++GV  V I+   +N
Sbjct: 214 RAGVKMVMIQDGPQN 228



 Score = 32.0 bits (71), Expect = 1.7
 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 277 GFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFV 336
           G  EF  +FI VP    G +IGK G+ I+ I  +SG    RIE         +  M  F 
Sbjct: 375 GLQEF--NFI-VPTGKTGLIIGKGGETIKSISQQSG---ARIELQRNPPPNADPNMKLFT 428

Query: 337 FVGTKESIGNVQVLLEYHI 355
             GT + I   + L+E  I
Sbjct: 429 IRGTPQQIDYARQLIEEKI 447


>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
          Length = 1301

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 48/248 (19%), Positives = 92/248 (37%), Gaps = 5/248 (2%)

Query: 372 DEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRD 431
           D++  Q    + S    G    N  S   ++S   + S    E KD  +     G +D D
Sbjct: 456 DDKSMQGDDPNSSDESNGNDDANSESDNNSSSR-GDASYNSDESKDNGNGSDSKGAEDDD 514

Query: 432 SRHQRDSRRRPG-GRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTAD 490
           S    D+      G G + +    +     GKS  S       SN     D+++SD +  
Sbjct: 515 SDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDS 574

Query: 491 TDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTA-SVNENGLVTVADYISRAESQSR 549
             +S+S  S +    S    + + +   D    SD++ S + +         S++ES S 
Sbjct: 575 NSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSS 634

Query: 550 QRNLPRETLAKNKKEMA--KDVIEEHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLK 607
             +   ++   N  + +   D  +    S  + +  +S S D  S    +   +  ++  
Sbjct: 635 DSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSD 694

Query: 608 EENTQEAA 615
             N+ E++
Sbjct: 695 SSNSSESS 702



 Score = 37.7 bits (86), Expect = 0.032
 Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 2/223 (0%)

Query: 396 TSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGR 455
           +S    +S+ SN S++        S  S    D  DS +  DS         S S     
Sbjct: 752 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSD 811

Query: 456 GGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDA 515
                   S +S      S+     ++++S  ++D+       S+NR   S    + + +
Sbjct: 812 SSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSS 871

Query: 516 VLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGP 575
              +    SD++  NE+     +D    + S     +    +   +    + D  E    
Sbjct: 872 DSSNSSDSSDSSDSNESS--NSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNS 929

Query: 576 SEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAAVLN 618
           S+ + +  +S S D       +   +  N+    N+ +++  N
Sbjct: 930 SDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSN 972



 Score = 37.7 bits (86), Expect = 0.032
 Identities = 39/224 (17%), Positives = 87/224 (38%), Gaps = 14/224 (6%)

Query: 394  NYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGR 453
            N +S    +S+ SN S+++S      SD S       DS +  DS         S S   
Sbjct: 886  NESSNSSDSSDSSNSSDSDSSDSSNSSDSS-------DSSNSSDSSESSNSSDNSNSSDS 938

Query: 454  GRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDE 513
                     S  S+     +S+     D++ S  ++D+++S+S  S+N    S    + +
Sbjct: 939  SNSSDSSDSSDSSNSSDSSNSS-----DSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSD 993

Query: 514  DAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEM--AKDVIE 571
             +   D    SD++  +++   + +   S +   S   +    + + +  +   + D  +
Sbjct: 994  SSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD 1053

Query: 572  EHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAA 615
                S+ + +  +S S D       +   E  ++    N+ +++
Sbjct: 1054 SSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSS 1097



 Score = 37.0 bits (84), Expect = 0.054
 Identities = 40/219 (18%), Positives = 83/219 (37%), Gaps = 4/219 (1%)

Query: 401 TNSELSNPSETESERKDELSDWSLAGE--DDRDSRHQRDSRRRPGGRGRSVSGGRGRGGP 458
           ++S+ S+ S+++S      SD S + +  D  DS    DS+          S    +   
Sbjct: 583 SDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDS 642

Query: 459 RGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLM 518
               SS SS   D   +  S   +  SD +  +D+S S  S+N    S    +   +   
Sbjct: 643 SDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESS 702

Query: 519 DG--MTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPS 576
           D    ++SD++  +++     +D  S   S S   +   ++   +    + D  +    S
Sbjct: 703 DSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSS 762

Query: 577 EKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAA 615
             + +  +S S D       +   +  N+    ++  ++
Sbjct: 763 NSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSS 801



 Score = 36.6 bits (83), Expect = 0.071
 Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 1/195 (0%)

Query: 396  TSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGR 455
            +S    +S+ S+ S++        S  S    D  DS    DS         S S     
Sbjct: 1093 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSD 1152

Query: 456  GGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDA 515
                   S  S      DS+  S   N+ SD +  +D+S+S  S++    S    + + +
Sbjct: 1153 SSDSSDSSDSSDSSDSSDSSDSSDSSNS-SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1211

Query: 516  VLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGP 575
               D    SD++  +++     +   S +   S   N    + + +  +   D  +E   
Sbjct: 1212 DSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDS 1271

Query: 576  SEKAINGPTSASGDD 590
              K+ NG  + S  D
Sbjct: 1272 QSKSGNGNNNGSDSD 1286



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 20/197 (10%)

Query: 396 TSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGR 455
           +S    +SE S+ S++      + SD S +   D DS +  DS         S       
Sbjct: 692 SSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSS------- 744

Query: 456 GGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDA 515
                  SS SS   D   +  S   +  SD +  +D+S+S +S++    S    + + +
Sbjct: 745 ------DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSS 798

Query: 516 VLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGP 575
              D    SD++  +++         S + + S   N    + + N  + +       G 
Sbjct: 799 NSSDSSNSSDSSDSSDSS-------DSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGS 851

Query: 576 SEKAINGPTSASGDDIS 592
              + N   S++  D S
Sbjct: 852 DSDSSNRSDSSNSSDSS 868



 Score = 35.0 bits (79), Expect = 0.21
 Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 4/157 (2%)

Query: 380 SRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGE--DDRDSRHQRD 437
           S S   +    +  + +S   + S+ S+ + ++S    + SD S +    D  DS    D
Sbjct: 617 SDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSD 676

Query: 438 SRRRPGGRGRSVSGGRG--RGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASE 495
           S         S S              SS SS     DS+  S  ++++SD +  +D+S+
Sbjct: 677 SSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSD 736

Query: 496 SHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNEN 532
           S +S++    S    + + +   D    SD++  +++
Sbjct: 737 SSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 773



 Score = 34.7 bits (78), Expect = 0.27
 Identities = 42/221 (19%), Positives = 77/221 (34%), Gaps = 6/221 (2%)

Query: 397 SGYGTNSELSNPSETESERKDEL-SDWSLAGEDDRDSRHQRDS-RRRPGGRGRSVSGGRG 454
           S   +NS  SN S   S+  D   S  S    D  DS    DS          S      
Sbjct: 776 SSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDS 835

Query: 455 RGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDED 514
                   SS SS   D DS+  S      S+ +  +D+S+S +S++    S    +   
Sbjct: 836 SNSSDSSDSSDSSDGSDSDSSNRS----DSSNSSDSSDSSDSSNSSDSSDSSDSNESSNS 891

Query: 515 AVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHG 574
           +   D    SD+ S + +     +D  + ++S     +      + +          +  
Sbjct: 892 SDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSS 951

Query: 575 PSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAA 615
            S  + N   S++  D S    +   +  N+    ++ +++
Sbjct: 952 NSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSS 992



 Score = 33.9 bits (76), Expect = 0.46
 Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 2/221 (0%)

Query: 397  SGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRG 456
            S  G++S+ SN S++ +      S  S    D  DS    +S         S S      
Sbjct: 847  SSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSS 906

Query: 457  -GPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDA 515
                   SS SS   D   +  S  ++  SD +  +D+S+S  S+N    S    +   +
Sbjct: 907  DSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSS 966

Query: 516  VLMDGMTESDTASVNENGLVTVADYISRAE-SQSRQRNLPRETLAKNKKEMAKDVIEEHG 574
               D  +   + S N +     +D    ++ S S   +   ++   +    + D      
Sbjct: 967  DSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSD 1026

Query: 575  PSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAA 615
             S  + +  +S S D       +   +  N+    ++ +++
Sbjct: 1027 SSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1067



 Score = 33.9 bits (76), Expect = 0.46
 Identities = 42/224 (18%), Positives = 85/224 (37%), Gaps = 5/224 (2%)

Query: 394  NYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGR 453
            N +    +NS  S+ S   S+  D  S  S    D  DS +  DS         S S   
Sbjct: 964  NSSDSSDSNSSDSSDSSNSSDSSD--SSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDS 1021

Query: 454  GRGGPRGGKSSISSVLKDPDSNPYS-LLDNTESDQTADT-DASESHHSTNRRRRSRRRRT 511
                     S  S      DS+  S   D+++S  ++D+ D+S+S  S++    S    +
Sbjct: 1022 SNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDS 1081

Query: 512  DEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIE 571
             E +   D    SD++  +++   + +   S +   S   N    + + +  + + D   
Sbjct: 1082 SESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSD-SSDSSN 1140

Query: 572  EHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAA 615
                S+ + +  +S S D       +   +  ++    N+ +++
Sbjct: 1141 SSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSS 1184



 Score = 29.6 bits (65), Expect = 8.6
 Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 27/150 (18%)

Query: 396  TSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGR 455
            +S    +S+ SN S++        S  S    D  DS    DS                 
Sbjct: 1168 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS----------------- 1210

Query: 456  GGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDA 515
                   SS SS   D   +  S   N  SD +  +D+S+S +S++    S     D   
Sbjct: 1211 -----SDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSS-----DSSD 1260

Query: 516  VLMDGMTESDTASVNENGLVTVADYISRAE 545
               D   ESD+ S + NG    +D  S +E
Sbjct: 1261 STSDSNDESDSQSKSGNGNNNGSDSDSDSE 1290


>gi|100816392 far upstream element (FUSE) binding protein 3 [Homo
           sapiens]
          Length = 572

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 29/130 (22%)

Query: 221 EEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDED---TGT---FRIYGESADAVKK 274
           +E ++    +GL IG  G  I+Q ++  GV  + + +    TG     RI G++    + 
Sbjct: 165 QEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQA 224

Query: 275 ARGFLEFVE------------DF----------IQVPRNLVGKVIGKNGKVIQEIVDKSG 312
               LE +             DF          + VPR  VG VIG+NG++I++I + +G
Sbjct: 225 REMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAG 284

Query: 313 VVRVRIEGDN 322
            VR++ + D+
Sbjct: 285 -VRIQFKPDD 293



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 7/69 (10%)

Query: 283 EDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKE 342
           E+F +VP  +VG +IG+ G+ I  I  +SG  +++I  ++     R     P V  GT E
Sbjct: 80  EEF-KVPDKMVGFIIGRGGEQISRIQAESG-CKIQIASESSGIPER-----PCVLTGTPE 132

Query: 343 SIGNVQVLL 351
           SI   + LL
Sbjct: 133 SIEQAKRLL 141


>gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a
           [Homo sapiens]
          Length = 464

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 286 IQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIG 345
           + +P++L G +IGK G+ I++I  +SG   ++I+   E     ED ++     GT++ I 
Sbjct: 392 VTIPKDLAGSIIGKGGQRIKQIRHESG-ASIKIDEPLEGS---EDRII--TITGTQDQIQ 445

Query: 346 NVQVLLEYHIAYLKEVE 362
           N Q LL+  +    +VE
Sbjct: 446 NAQYLLQNSVKQYADVE 462


>gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a
           [Homo sapiens]
          Length = 464

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 286 IQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIG 345
           + +P++L G +IGK G+ I++I  +SG   ++I+   E     ED ++     GT++ I 
Sbjct: 392 VTIPKDLAGSIIGKGGQRIKQIRHESG-ASIKIDEPLEGS---EDRII--TITGTQDQIQ 445

Query: 346 NVQVLLEYHIAYLKEVE 362
           N Q LL+  +    +VE
Sbjct: 446 NAQYLLQNSVKQYADVE 462


>gi|239048862 checkpoint with forkhead and ring finger domains
           isoform 2 [Homo sapiens]
          Length = 663

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 16/171 (9%)

Query: 299 KNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYL 358
           K+G+V  E    SG V  +++   +   P + G V ++     E   NV  L E     L
Sbjct: 68  KSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYES----L 123

Query: 359 KEVEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDE 418
            E + +  E  + +++    G++  SG G GR         G +  +  PS   ++   E
Sbjct: 124 SEKQGMTQESFEANKENVFHGTKDTSGAGAGR---------GADPRVP-PSSPATQVCFE 173

Query: 419 LSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGG--PRGGKSSISS 467
               S +  D   +     +   P GR RS S G G GG  P+G   S++S
Sbjct: 174 EPQPSTSTSDLFPTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVAS 224


>gi|239048792 checkpoint with forkhead and ring finger domains
           isoform 1 [Homo sapiens]
          Length = 664

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 16/171 (9%)

Query: 299 KNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYL 358
           K+G+V  E    SG V  +++   +   P + G V ++     E   NV  L E     L
Sbjct: 68  KSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYES----L 123

Query: 359 KEVEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDE 418
            E + +  E  + +++    G++  SG G GR         G +  +  PS   ++   E
Sbjct: 124 SEKQGMTQESFEANKENVFHGTKDTSGAGAGR---------GADPRVP-PSSPATQVCFE 173

Query: 419 LSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGG--PRGGKSSISS 467
               S +  D   +     +   P GR RS S G G GG  P+G   S++S
Sbjct: 174 EPQPSTSTSDLFPTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVAS 224


>gi|52426743 cisplatin resistance-associated overexpressed protein
           [Homo sapiens]
          Length = 432

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 67/329 (20%), Positives = 116/329 (35%), Gaps = 36/329 (10%)

Query: 298 GKNGKVIQEIVDKSGVVRVRIEG-DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIA 356
           GKN + IQ + DK  V+  +IE   +E K+    GM+  V     E +   + LL    +
Sbjct: 123 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLV-----EQLKEERELLRSTTS 177

Query: 357 YLKE--VEQLRMERLQIDEQLRQIGSRS--YSGRGRGRRGPNYTSGYGTNSELSNPSETE 412
            ++    ++ +ME  ++      +G           G++   Y     T  EL       
Sbjct: 178 TIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKR 237

Query: 413 SERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDP 472
           +E  D         E  +  + +R+ R +   R R     R R   R  +       +D 
Sbjct: 238 TEEPDR-------DERLKKEKQEREEREKEREREREE---RERKRRREEEEREKERARDR 287

Query: 473 DSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNEN 532
           +    S   +  S +T+D   S S      R R RRR    D         S+       
Sbjct: 288 ERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERK----- 342

Query: 533 GLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDIS 592
                     R+ S+ R+R+  R+  +   +  ++D  ++    EK   G         S
Sbjct: 343 ---------HRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKS 393

Query: 593 KLQRTPGEEKINTLKEENTQEAAVLNGVS 621
             +    E+     KE +T+    +NG S
Sbjct: 394 GSREKQSEDTNTESKESDTKNE--VNGTS 420


>gi|19923485 cisplatin resistance-associated overexpressed protein
           [Homo sapiens]
          Length = 432

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 67/329 (20%), Positives = 116/329 (35%), Gaps = 36/329 (10%)

Query: 298 GKNGKVIQEIVDKSGVVRVRIEG-DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIA 356
           GKN + IQ + DK  V+  +IE   +E K+    GM+  V     E +   + LL    +
Sbjct: 123 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLV-----EQLKEERELLRSTTS 177

Query: 357 YLKE--VEQLRMERLQIDEQLRQIGSRS--YSGRGRGRRGPNYTSGYGTNSELSNPSETE 412
            ++    ++ +ME  ++      +G           G++   Y     T  EL       
Sbjct: 178 TIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKR 237

Query: 413 SERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDP 472
           +E  D         E  +  + +R+ R +   R R     R R   R  +       +D 
Sbjct: 238 TEEPDR-------DERLKKEKQEREEREKEREREREE---RERKRRREEEEREKERARDR 287

Query: 473 DSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNEN 532
           +    S   +  S +T+D   S S      R R RRR    D         S+       
Sbjct: 288 ERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERK----- 342

Query: 533 GLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDIS 592
                     R+ S+ R+R+  R+  +   +  ++D  ++    EK   G         S
Sbjct: 343 ---------HRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKS 393

Query: 593 KLQRTPGEEKINTLKEENTQEAAVLNGVS 621
             +    E+     KE +T+    +NG S
Sbjct: 394 GSREKQSEDTNTESKESDTKNE--VNGTS 420


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 44/262 (16%)

Query: 375  LRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETES---ERKDELSDWSLAGEDDRD 431
            L Q+ +   S    GR GP+     G+  E +  S   S   E +D +     +    R 
Sbjct: 3711 LYQVSTHEQSESAHGRAGPSTGGRQGSRHEQARDSSRHSASQEGQDTIRGHPGSRRGGRQ 3770

Query: 432  SRHQRDSRRRPG--GRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTES---D 486
              +   S  R G  G   S +  +GR     G+S   S  ++  +   S   +  S    
Sbjct: 3771 GSYHEQSVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRH 3830

Query: 487  QTADTDASESHHSTNRRRR---SRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISR 543
              A T A  S HS + +     SRR R    +V  D    SD+ +  E       D   R
Sbjct: 3831 HEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQD----SDSEAYPE-------DSERR 3879

Query: 544  AESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGEEKI 603
            +ES SR  +        + +E ++D     G S +          D  S +Q +P +   
Sbjct: 3880 SESASRNHH-------GSSREQSRDGSRHPGSSHR----------DTASHVQSSPVQSDS 3922

Query: 604  NTLKEEN-----TQEAAVLNGV 620
            +T KE       +Q++A  +G+
Sbjct: 3923 STAKEHGHFSSLSQDSAYHSGI 3944



 Score = 35.0 bits (79), Expect = 0.21
 Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 24/154 (15%)

Query: 362  EQLRMERLQIDEQLRQIGSRSYSGRGRG-RRGPNYTSGYGTNSEL-SNPSETESERKDEL 419
            EQ R        Q  Q   R + G  RG R+G +Y     ++    S+ S T S+ + ++
Sbjct: 1795 EQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHYEQSVDSSGHSGSHHSHTTSQERSDV 1854

Query: 420  S--------------DWSLAGEDDRDS--RHQRDSRRRPGGRGRSVSGGRGRGGPRGGKS 463
            S              +   +G+  R S  RH   S R    R   V  G+   GPR  ++
Sbjct: 1855 SRGQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHSQVGQGQS-SGPRTSRN 1913

Query: 464  SISSVLKDPDSNPYSLLDNTESDQTADTDASESH 497
              SSV +D DS  +S     E  +     AS +H
Sbjct: 1914 QGSSVSQDSDSQGHS-----EDSERWSGSASRNH 1942



 Score = 33.1 bits (74), Expect = 0.78
 Identities = 44/177 (24%), Positives = 62/177 (35%), Gaps = 16/177 (9%)

Query: 373 EQLRQIGSRSYSGRGRGRR-GPNYTSGYGTNSELSNPSETESERKDELSDWSL------A 425
           E   Q  S  +S  G+G+  GP  +   G++    + S+  SE  +  S  +       A
Sbjct: 590 EASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHHGSA 649

Query: 426 GEDDRD-SRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTE 484
            E  RD SRH R       G G S    R  G      SS        +    S  +   
Sbjct: 650 QEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTRHTQNSSSGQAASSHEQARSSAGERHG 709

Query: 485 SDQTADTDASESHHSTNR-------RRRSRRRRTDEDAVLMDGMTE-SDTASVNENG 533
           S     +  S  H  T         R    R  +   A   +G +E SDT SV+ +G
Sbjct: 710 SRHQLQSADSSRHSGTGHGQASSAVRDSGHRGSSGSQATDSEGHSEDSDTQSVSGHG 766



 Score = 33.1 bits (74), Expect = 0.78
 Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 24/145 (16%)

Query: 389  GRRGPNYT-----SGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPG 443
            GR+G +Y      SG+  +      S+  S+     S    A    R+     D  R  G
Sbjct: 2472 GRQGSHYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGSRHSG 2531

Query: 444  GRGRSVSG----------GRGRG-GPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTD 492
             R    S           G+G+  GPR  ++  SS  +D DS  +S     E  +     
Sbjct: 2532 SRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSSFSQDSDSQGHS-----EDSERWSGS 2586

Query: 493  ASESHHSTNR---RRRSRRRRTDED 514
            AS +HH + +   R  SR  R+ ++
Sbjct: 2587 ASRNHHGSAQEQLRDGSRHPRSHQE 2611



 Score = 32.0 bits (71), Expect = 1.7
 Identities = 51/241 (21%), Positives = 89/241 (36%), Gaps = 14/241 (5%)

Query: 380  SRSYSG--RGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRD 437
            S  +SG  RG+       +  +G++   ++ SE  SE  D  S             HQ  
Sbjct: 3312 SSRHSGIPRGQASSAVRDSRHWGSSGSQASDSEGHSEESDTQSVSGHGQAGPHQQSHQES 3371

Query: 438  SRRRPGGR-GRSVS-----GGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADT 491
            +R R GGR GRS S         +     G++  S+  +    +  +   +  S      
Sbjct: 3372 ARDRSGGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQ 3431

Query: 492  DASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQR 551
            D    H  ++  RR R+    E +V   G + S  +     G    +   S + S SRQ 
Sbjct: 3432 DTIRGHPGSS--RRGRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQT 3489

Query: 552  NLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENT 611
                ++   ++   +      H  S +A +   S SG   S   RT   +  +  ++ ++
Sbjct: 3490 RNDEQSGDGSRHSWS----HHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDS 3545

Query: 612  Q 612
            Q
Sbjct: 3546 Q 3546



 Score = 31.2 bits (69), Expect = 3.0
 Identities = 36/155 (23%), Positives = 56/155 (36%), Gaps = 29/155 (18%)

Query: 370  QIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELS---------NPSETESERKDELS 420
            Q  +  R   S+      RG  GP+     G++ E S         + S T S+ + + S
Sbjct: 2121 QAQDSSRHSASQEGQDTIRGHPGPSRGGRQGSHQEQSVDRSGHSGSHHSHTTSQGRSDAS 2180

Query: 421  --------------DWSLAGEDDRDS-RHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSI 465
                          D   +G+  R S  H  ++         S+ G     GPR  +   
Sbjct: 2181 RGQSGSRSASRKTYDKEQSGDGSRHSGSHHHEASSWADSSRHSLVGQGQSSGPRTSRPRG 2240

Query: 466  SSVLKDPDSNPYSLLDNTESDQTADTDASESHHST 500
            SSV +D DS  +S     E  +     AS +HH +
Sbjct: 2241 SSVSQDSDSEGHS-----EDSERRSGSASRNHHGS 2270



 Score = 30.8 bits (68), Expect = 3.9
 Identities = 40/163 (24%), Positives = 59/163 (36%), Gaps = 15/163 (9%)

Query: 379  GSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDS 438
            GSR+   +G      + + G+  +SE  + S + + R       S   +    SRH R  
Sbjct: 935  GSRTSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRG------SAQEQSRHGSRHPRSH 988

Query: 439  RRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHH 498
                 G G S    R  G P    SS        +    S  +   S      D+S  H 
Sbjct: 989  HEDRAGHGHSADSSRQSGTPHAETSSGGQAASSHEQARSSPGERHGSRHQQSADSSR-HS 1047

Query: 499  STNRRRRSRRRR-------TDEDAVLMDGMT-ESDTASVNENG 533
               RR+ S   R       +   A   +G + ESDT SV+ +G
Sbjct: 1048 GIPRRQASSAVRDSGHWGSSGSQASDSEGHSEESDTQSVSGHG 1090



 Score = 30.8 bits (68), Expect = 3.9
 Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 24/157 (15%)

Query: 362  EQLRMERLQIDEQLRQIGSRSYSGRGR-GRRGPNY----------------TSGYGTNSE 404
            EQ R        Q  Q   R + G  R GR+G +Y                T+  G +  
Sbjct: 3416 EQARDSSRHSASQEGQDTIRGHPGSSRRGRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDA 3475

Query: 405  LSNPSETESERKDELSDWSLAGEDDRDS-RHQRDSRRRPGGRGRSVSGGRGRGGPRGGKS 463
                S + S  +   +D   +G+  R S  H  ++  +      S SG     GPR  ++
Sbjct: 3476 SRGQSGSRSASRQTRND-EQSGDGSRHSWSHHHEASTQADSSRHSQSGQGQSAGPRTSRN 3534

Query: 464  SISSVLKDPDSNPYSLLDNTESDQTADTDASESHHST 500
              SSV +D DS  +S     E  +     AS +H  +
Sbjct: 3535 QGSSVSQDSDSQGHS-----EDSERWSGSASRNHRGS 3566



 Score = 30.0 bits (66), Expect = 6.6
 Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 23/154 (14%)

Query: 362  EQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSD 421
            EQ R    +      Q  + S +  G GRR  +   G   N   S    ++SE   E SD
Sbjct: 1671 EQARSSPGERHGSRHQQSADSSTDSGTGRRQDSSVVGDSGNRGSSGSQASDSEGHSEESD 1730

Query: 422  WSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLD 481
                    +   HQ+  +             RG+ G R G+S              S L 
Sbjct: 1731 TQSVSAHGQAGPHQQSHQ----------ESTRGQSGERSGRSG-------------SFLY 1767

Query: 482  NTESDQTADTDASESHHSTNRRRRSRRRRTDEDA 515
               + + +++    +  ST  R+RSR  +  + +
Sbjct: 1768 QVSTHEQSESAHGRTGPSTGGRQRSRHEQARDSS 1801



 Score = 30.0 bits (66), Expect = 6.6
 Identities = 42/166 (25%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 382  SYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSL------AGEDDRD-SRH 434
            S  G+G+   GP  +   G++    + SE  SE  +  S  +       A E  RD SRH
Sbjct: 2223 SLVGQGQSS-GPRTSRPRGSSVSQDSDSEGHSEDSERRSGSASRNHHGSAQEQSRDGSRH 2281

Query: 435  QRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDAS 494
             R       G G S    R  G      SS        +    S  +   S      D+S
Sbjct: 2282 PRSHHEDRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHHQQSADSS 2341

Query: 495  ------ESHHSTNRRRRSRRRRTDEDAVLMDGMTE-SDTASVNENG 533
                      S+  R    R  +   A   +G +E SDT SV+ +G
Sbjct: 2342 RHSGIGHGQASSAVRDSGHRGSSGSQASDSEGHSEDSDTQSVSAHG 2387



 Score = 30.0 bits (66), Expect = 6.6
 Identities = 45/217 (20%), Positives = 77/217 (35%), Gaps = 14/217 (6%)

Query: 365  RMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSL 424
            R  R  + EQ R  GSR        R      +G+G +++ S  S T           + 
Sbjct: 3237 RNHRGSVQEQSRH-GSRHPRSHHEDR------AGHGHSADRSRQSGTRHAETSSGGQAAS 3289

Query: 425  AGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTE 484
            + E  R S  +R   R      +S    R  G PRG  SS     +   S+     D+  
Sbjct: 3290 SHEQARSSPGERHGSRHQ----QSADSSRHSGIPRGQASSAVRDSRHWGSSGSQASDSEG 3345

Query: 485  SDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRA 544
              + +DT +   H      ++S +    + +    G + S    V+ +     A   +R 
Sbjct: 3346 HSEESDTQSVSGHGQAGPHQQSHQESARDRSGGRSGRSGSFLYQVSTHEQSESAHGRTRT 3405

Query: 545  ESQSRQ---RNLPRETLAKNKKEMAKDVIEEHGPSEK 578
             +  RQ       R++   +  +  +D I  H  S +
Sbjct: 3406 STGRRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSR 3442


>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
           sapiens]
          Length = 1031

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 34/193 (17%)

Query: 400 GTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRR------------RPGGRGR 447
           G+ S   +PS+  S+R D+    S   +  R+    RD RR            R   R R
Sbjct: 19  GSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDR 78

Query: 448 SVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSR 507
           S    R R   R    S S   +   S+P +    TE       + S S   T+    S+
Sbjct: 79  SRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTE-------NRSRSKEKTDGGESSK 131

Query: 508 RRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAK 567
            ++ D+D    +   E D  + ++N L          E + R+R   +E + K ++E  K
Sbjct: 132 EKKKDKDD--KEDEKEKDAGNFDQNKL----------EEEMRKR---KERVEKWREEQRK 176

Query: 568 DVIEEHGPSEKAI 580
             +E  G  +K I
Sbjct: 177 KAMENIGELKKEI 189



 Score = 30.0 bits (66), Expect = 6.6
 Identities = 41/196 (20%), Positives = 72/196 (36%), Gaps = 31/196 (15%)

Query: 430 RDSRHQRDSRRRPGGRGRSVSGGRG---------RGGPRGGKSSISSVLKDPDSNPYSLL 480
           R+SRH R   +R   RGRS S  R          RG  R  +S      ++   +     
Sbjct: 3   RESRHYR---KRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRR 59

Query: 481 DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY 540
             +   +      S     +  RRRSR R          G     ++  N++        
Sbjct: 60  SRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKS-------- 111

Query: 541 ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDISKLQR--TP 598
               ++++R R+  +    ++ KE  KD  ++    EK       A   D +KL+     
Sbjct: 112 ---KKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEK------DAGNFDQNKLEEEMRK 162

Query: 599 GEEKINTLKEENTQEA 614
            +E++   +EE  ++A
Sbjct: 163 RKERVEKWREEQRKKA 178


>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
          Length = 696

 Score = 38.1 bits (87), Expect = 0.024
 Identities = 50/299 (16%), Positives = 114/299 (38%), Gaps = 43/299 (14%)

Query: 350 LLEYHIAYLKEVEQLRMERLQIDE--QLRQIGSRSYSGRGRG---RRGPNYTSGYGTNSE 404
           ++++   Y +++EQ R+   Q++E  QLR+     +  R +G   R+             
Sbjct: 400 MIKFQSPYEEQLEQQRLAVQQVEEAQQLREHQEALHQQRLQGHLLRQQEQQQQQVAREMA 459

Query: 405 LSNPSETESERKDE--------------------LSDWSLAGED---DRDSRHQRDSRRR 441
           L   +E E  R                         D  + GE+   +RD++HQ ++   
Sbjct: 460 LQRQAELEEGRPQHQEQLRQQAHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGD 519

Query: 442 PGGRGRSVSGGRGRGGP--RGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHS 499
           PG R      G     P     ++++  +    D N     +  E++Q  + +  + +  
Sbjct: 520 PGNRHEPREQGPREADPESEADRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDENEE 579

Query: 500 TNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLA 559
             +  + +     E+ ++M G  +    +V+E        Y   AE + ++     +   
Sbjct: 580 QKQSNQKQENTEVEEHLVMAGNPDQQEDNVDE-------QYQEEAEEEVQE-----DLTE 627

Query: 560 KNKKEMAKDVIEEHGPSEKAINGPTS-ASGDDISKLQRTPGEEKINTLKEENTQEAAVL 617
           + K+E+  +  E +G +++  +   +     ++    R  G E+    +EE  ++ A +
Sbjct: 628 EKKRELEHNAEETYGENDENTDDKNNDGEEQEVRDDNRPKGREEHYEEEEEEEEDGAAV 686


>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
          Length = 1257

 Score = 37.7 bits (86), Expect = 0.032
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 384 SGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPG 443
           SG GRG  G   ++G G++S  S  ++   E +         G+    ++  RD +   G
Sbjct: 495 SGNGRGSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAG 554

Query: 444 GR----GRSVSGGRGRGGPRG 460
           G     G+   GG G GG +G
Sbjct: 555 GHGSGGGQRPGGGHGSGGGQG 575



 Score = 31.6 bits (70), Expect = 2.3
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 10/87 (11%)

Query: 379 GSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDS 438
           G    SG G+G RG     G G+N + S  ++   + +         G       H    
Sbjct: 518 GGNQCSGEGQGSRG-----GQGSNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGG 572

Query: 439 RRRPG-----GRGRSVSGGRGRGGPRG 460
            + PG     G G++  GG+G G  +G
Sbjct: 573 GQGPGDGHGSGGGKNSGGGKGSGSGKG 599


>gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo
           sapiens]
          Length = 482

 Score = 37.7 bits (86), Expect = 0.032
 Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 26/129 (20%)

Query: 383 YSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRP 442
           Y  R RGRR P+    Y  N         ESERK        + +    SR + +SR R 
Sbjct: 373 YYSRLRGRRNPSPDHSYKRNG--------ESERKSSRHRGKKSHKRTSKSRERHNSRSRG 424

Query: 443 GGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNR 502
             R RS    RGRG     +S                   +   + + + +S    S  R
Sbjct: 425 RNRDRSRDRSRGRGSRSRSRS------------------RSRRSRRSRSQSSSRSRSRGR 466

Query: 503 RRRSRRRRT 511
           RR   R RT
Sbjct: 467 RRSGNRDRT 475


>gi|194097341 period 1 [Homo sapiens]
          Length = 1290

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 13/140 (9%)

Query: 364  LRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWS 423
            L++  LQ++E  R  G+    G G    GP   S      E      TES  +D LS  S
Sbjct: 982  LQLNLLQLEELPRAEGAAVAGGPGSSA-GPPPPSAEAAEPEARLAEVTESSNQDALSGSS 1040

Query: 424  -----LAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNP-- 476
                 L  ED R       S    G  G  +  G G G   GG +S S       S+   
Sbjct: 1041 DLLELLLQEDSRSGTGSAAS----GSLGSGLGSGSGSGSHEGGSTSASITRSSQSSHTSK 1096

Query: 477  -YSLLDNTESDQTADTDASE 495
             +  +D++E++  A    +E
Sbjct: 1097 YFGSIDSSEAEAGAARGGAE 1116


>gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b
           [Homo sapiens]
          Length = 463

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 286 IQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIG 345
           + +P++L G +IGK G+ I++I  +SG   ++I+   E     ED ++     GT++ I 
Sbjct: 392 VTIPKDLAGSIIGKGGQRIKQIRHESG-ASIKIDEPLEGS---EDRII--TITGTQDQIQ 445

Query: 346 NVQVLLE 352
           N Q LL+
Sbjct: 446 NAQYLLQ 452


>gi|217330641 IWS1 homolog [Homo sapiens]
          Length = 819

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 27/223 (12%)

Query: 393 PNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGG 452
           P + +    N EL  P  ++SE +D   + +   E++   + +       G +    S  
Sbjct: 256 PRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDS 315

Query: 453 RGRGGPRGGKSSISSVLKDPDSNPYSLLDNTE-------SDQTADTDASESHHSTNRRRR 505
                 R  +   S    D DS+  +  ++TE       SD   D     S  S     +
Sbjct: 316 ETEDASRHKQKPES----DDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHK 371

Query: 506 SRRRRTDED--------------AVLMDGMTESDTASVNENGLVTVADYISRAESQSRQR 551
            ++  +DED              AVL D   E + AS  ++ +V+ AD  S +++ S + 
Sbjct: 372 KQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDE-EKASAKKSRVVSDADD-SDSDAVSDKS 429

Query: 552 NLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDDISKL 594
               +T+A + +E A   + +    EK + G  S SG++   L
Sbjct: 430 GKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEENL 472


>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
           sapiens]
          Length = 434

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 61/250 (24%), Positives = 92/250 (36%), Gaps = 19/250 (7%)

Query: 357 YLKEVEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERK 416
           Y +   + R  + + D + R+  SRS S  GR R      S     SE  N  E  S++ 
Sbjct: 40  YSRSRSRSRERKRKSDNEGRKHRSRSRSKEGR-RHESKDKSSKKHKSEEHNDKEHSSDKG 98

Query: 417 DELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGG---RGRGGPRGGKSSISSVLKDPD 473
            E  + S  GED    RH+R  R+   GR  S S     R R   R  K S S   +   
Sbjct: 99  RERLNSSENGED----RHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKK 154

Query: 474 SNPYSLLDNTESDQTAD-------TDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDT 526
           S   S        ++ +          S S H    R RSR R    D           +
Sbjct: 155 SRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFS 214

Query: 527 ASVNENGLVTVADYISRAESQSRQRNLPR--ETLAKNKKEMAKDVIEEHGPSEKAINGPT 584
            S++     +   +  R  +   Q  L R  E   K +++  K+++E+    E A    T
Sbjct: 215 RSLSRT--PSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAAT 272

Query: 585 SASGDDISKL 594
             S  +++ L
Sbjct: 273 GGSVLNVAAL 282


>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
           [Homo sapiens]
          Length = 666

 Score = 36.6 bits (83), Expect = 0.071
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 32/210 (15%)

Query: 409 SETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSV 468
           +++E+ERKD             DS    DS +     G + SG       RG        
Sbjct: 12  ADSEAERKDS------------DSGSDSDSDQENAASGSNASGSESDQDERGDSGQ---- 55

Query: 469 LKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDA-----VLMDGMTE 523
                SN     D++E +  +    S++H   +  R     R+D +      V     +E
Sbjct: 56  ----PSNKELFGDDSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGSE 111

Query: 524 SDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGP 583
           +     +E        + S AE   +  +   +   ++K + + D   ++   E+     
Sbjct: 112 APNDDEDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKIQNSDDEER---- 167

Query: 584 TSASGDDISKLQRTPGEEKI-NTLKEENTQ 612
             A G D  KLQ +  +EK+ NT  EE  Q
Sbjct: 168 --AQGSDEDKLQNSDDDEKMQNTDDEERPQ 195


>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
          Length = 282

 Score = 36.6 bits (83), Expect = 0.071
 Identities = 57/205 (27%), Positives = 78/205 (38%), Gaps = 38/205 (18%)

Query: 368 RLQIDEQLRQIGSRSYSGRGRGR-RGPNYTSGYGTNSELSNPSETESERKDELSDWSLAG 426
           R+Q+    R+   RS  G  RGR RG     GYG  S                       
Sbjct: 86  RVQVARYGRRDLPRSRQGEPRGRSRG----GGYGRRSRSYG------------------- 122

Query: 427 EDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDS------NPYSLL 480
              R SR  R  R R   RG S S  R R   RG + S S   + P S      +PYS  
Sbjct: 123 ---RRSRSPR-RRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRS 178

Query: 481 DNTESDQTADTDASESHHSTNRRRR---SRRRRTDEDAVLMDGMTESDTASVNENGLVTV 537
              ES +   +  S S +S +R  R   SR       +      + S ++S   +   +V
Sbjct: 179 RYRES-RYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSV 237

Query: 538 ADYISRAESQSRQRNLPRETLAKNK 562
           +   SR+ S S  R+ PR +  K+K
Sbjct: 238 SRSRSRSRSSSMTRSPPRVSKRKSK 262


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.131    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,872,539
Number of Sequences: 37866
Number of extensions: 1126542
Number of successful extensions: 5523
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 4805
Number of HSP's gapped (non-prelim): 720
length of query: 621
length of database: 18,247,518
effective HSP length: 108
effective length of query: 513
effective length of database: 14,157,990
effective search space: 7263048870
effective search space used: 7263048870
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press