FMR1 28658

Name: FMR1	Sequence: fasta or formatted (632aa)		NCBI GI: 4503765
Description: fragile X mental retardation 1		Referenced in: Additional Brain Proteins Major Disease Loci p53 Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 36 2 C cysteine 0.9 6 2 D aspartate 6.5 41 2 E glutamate 8.7 55 3 F phenylalanine 3.2 20 1 G glycine 7.6 48 4 H histidine 2.5 16 1 I isoleucine 4.4 28 1 K lysine 6.6 42 2 L leucine 6.0 38 2 M methionine 1.6 10 1 N asparagine 5.9 37 2 P proline 5.1 32 3 Q glutamine 4.4 28 2 R arginine 8.4 53 3 S serine 7.1 45 2 T threonine 4.6 29 2 V valine 7.8 49 2 W tryptophan 0.8 5 2 Y tyrosine 2.2 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 fragile X mental retardation 1 FXR1 0.386 fragile X mental retardation-related protein 1 isofo... FXR1 0.386 fragile X mental retardation-related protein 1 isofo... FXR2 0.367 fragile X mental retardation syndrome related protein... FXR1 0.272 fragile X mental retardation-related protein 1 isofo... HDGF2 0.015 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.015 hepatoma-derived growth factor-related protein 2 iso... ZC3H4 0.014 zinc finger CCCH-type containing 4 LOC100170229 0.014 hypothetical protein LOC100170229 BAT2 0.014 HLA-B associated transcript-2 HNRNPUL1 0.013 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.013 heterogeneous nuclear ribonucleoprotein U-like 1 iso... DDX46 0.013 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 XYLT1 0.012 xylosyltransferase I TDRKH 0.012 tudor and KH domain containing isoform a TDRKH 0.012 tudor and KH domain containing isoform a TDRKH 0.012 tudor and KH domain containing isoform a THRAP3 0.011 thyroid hormone receptor associated protein 3 [Homo... NKX1-1 0.011 PREDICTED: NK1 homeobox 1 NKX1-1 0.011 PREDICTED: HPX-153 homeobox GAR1 0.011 nucleolar protein family A, member 1 GAR1 0.011 nucleolar protein family A, member 1 AR 0.010 androgen receptor isoform 1 LOC100292150 0.010 PREDICTED: hypothetical protein LOC100290302 0.010 PREDICTED: hypothetical protein XP_002346480 LOC100287337 0.010 PREDICTED: hypothetical protein XP_002342320 DMKN 0.010 dermokine isoform 3 precursor LOC100127891 0.010 PREDICTED: hypothetical protein FBL 0.010 fibrillarin MRE11A 0.010 meiotic recombination 11 homolog A isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.