Guide to the Human Genome
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Name: OPRL1 Sequence: fasta or formatted (370aa) NCBI GI: 33286424
Description:

opiate receptor-like 1

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt mRNA [370aa] opiate receptor-like 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         33           1
 C cysteine            3.8         14           2
 D aspartate           3.2         12           1
 E glutamate           3.0         11           2
 F phenylalanine       5.4         20           1
 G glycine             5.4         20           2
 H histidine           1.6          6           1
 I isoleucine          6.2         23           1
 K lysine              2.7         10           1
 L leucine            13.5         50           3
 M methionine          1.9          7           1
 N asparagine          3.5         13           1
 P proline             5.4         20           2
 Q glutamine           2.4          9           1
 R arginine            5.4         20           2
 S serine              6.2         23           2
 T threonine           5.4         20           1
 V valine             11.6         43           3
 W tryptophan          1.4          5           1
 Y tyrosine            3.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   opiate receptor-like 1 
OPRL1                 1.000   opiate receptor-like 1 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1O 
OPRM1                 0.496   opioid receptor, mu 1 isoform MOR-1X 
OPRK1                 0.493   opioid receptor, kappa 1 
OPRD1                 0.486   opioid receptor, delta 1 
OPRM1                 0.447   opioid receptor, mu 1 isoform MOR-1G2 
OPRM1                 0.437   opioid receptor, mu 1 isoform MOR-1G1 
OPRM1                 0.437   opioid receptor, mu 1 isoform MOR1-K1 
SSTR1                 0.312   somatostatin receptor 1 
SSTR4                 0.310   somatostatin receptor 4 
SSTR5                 0.297   somatostatin receptor 5 
SSTR2                 0.286   somatostatin receptor 2 
SSTR3                 0.283   somatostatin receptor 3 
NPBWR1                0.280   G protein-coupled receptor 7 
NPBWR2                0.263   neuropeptides B/W receptor 2 
GALR2                 0.197   galanin receptor 2 
KISS1R                0.193   G protein-coupled receptor 54 
MCHR1                 0.183   G protein-coupled receptor 24 
GALR1                 0.182   galanin receptor 1 
CCR1                  0.168   chemokine (C-C motif) receptor 1 
CCR3                  0.168   CC chemokine receptor 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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