Guide to the Human Genome
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Name: ASB10 Sequence: fasta or formatted (474aa) NCBI GI: 215598824
Description:

ankyrin repeat and SOCS box-containing 10 isoform 2

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [452aa] ankyrin repeat and SOCS box-containing 10 isoform 3
alt prot [512aa] ankyrin repeat and SOCS box-containing 10 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         58           3
 C cysteine            3.8         18           1
 D aspartate           5.1         24           2
 E glutamate           5.5         26           5
 F phenylalanine       2.3         11           1
 G glycine             7.4         35           2
 H histidine           4.4         21           1
 I isoleucine          1.1          5           1
 K lysine              1.5          7           2
 L leucine            15.2         72           3
 M methionine          0.8          4           1
 N asparagine          1.1          5           1
 P proline             7.8         37           3
 Q glutamine           3.2         15           1
 R arginine            8.9         42           3
 S serine              7.4         35           2
 T threonine           4.2         20           2
 V valine              5.5         26           2
 W tryptophan          1.5          7           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing 10 isoform 2... 
ASB10                 0.980   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB10                 0.652   ankyrin repeat and SOCS box-containing 10 isoform 3...
ASB18                 0.268   ankyrin repeat and SOCS box-containing 18 
ASB16                 0.207   ankyrin repeat and SOCS box-containing protein 16 [H...
ASB4                  0.157   ankyrin repeat and SOCS box-containing protein 4 isof...
ASB4                  0.122   ankyrin repeat and SOCS box-containing protein 4 iso...
ANK2                  0.107   ankyrin 2 isoform 3 
ANK2                  0.107   ankyrin 2 isoform 2 
ANK2                  0.107   ankyrin 2 isoform 1 
ANK1                  0.102   ankyrin 1 isoform 9 
ANK1                  0.102   ankyrin 1 isoform 1 
ANK1                  0.102   ankyrin 1 isoform 3 
ANK1                  0.102   ankyrin 1 isoform 2 
ANK1                  0.102   ankyrin 1 isoform 4 
ANK3                  0.100   ankyrin 3 isoform 1 
ANKK1                 0.095   ankyrin repeat and kinase domain containing 1 
TNKS                  0.090   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD17               0.090   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.090   ankyrin repeat domain protein 17 isoform b 
TNKS2                 0.089   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
DAPK1                 0.088   death-associated protein kinase 1 
ANKRD44               0.087   ankyrin repeat domain 44 
ANKRD50               0.084   ankyrin repeat domain 50 
ASB5                  0.084   ankyrin repeat and SOCS box-containing protein 5 [Ho...
ANKRD35               0.083   ankyrin repeat domain 35 
ANKRD28               0.082   ankyrin repeat domain 28 
CASKIN1               0.082   CASK interacting protein 1 
EHMT2                 0.082   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.082   euchromatic histone-lysine N-methyltransferase 2 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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