TRIM61 33891

Name: TRIM61	Sequence: fasta or formatted (209aa)		NCBI GI: 60099474
Description: tripartite motif-containing 61		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 10 2 C cysteine 7.7 16 2 D aspartate 3.8 8 1 E glutamate 7.2 15 2 F phenylalanine 4.3 9 2 G glycine 1.9 4 1 H histidine 4.8 10 2 I isoleucine 5.3 11 2 K lysine 10.0 21 3 L leucine 10.0 21 2 M methionine 1.9 4 1 N asparagine 2.4 5 1 P proline 5.3 11 1 Q glutamine 3.8 8 1 R arginine 5.3 11 1 S serine 10.5 22 2 T threonine 4.3 9 1 V valine 3.8 8 1 W tryptophan 1.4 3 1 Y tyrosine 1.4 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 61 TRIM60 0.536 ring finger protein 129 TRIM75 0.400 tripartite motif-containing 75 TRIM39 0.294 tripartite motif-containing 39 isoform 2 TRIM39 0.294 tripartite motif-containing 39 isoform 1 TRIM17 0.208 tripartite motif-containing 17 isoform 3 TRIM17 0.208 tripartite motif-containing 17 isoform 1 TRIM17 0.208 tripartite motif-containing 17 isoform 1 TRIM43 0.199 tripartite motif-containing 43 LOC653192 0.196 PREDICTED: Tripartite motif-containing protein 43-li... TRIM11 0.187 tripartite motif-containing 11 TRIM4 0.182 tripartite motif protein TRIM4 isoform beta TRIM27 0.179 ret finger protein TRIM4 0.179 tripartite motif protein TRIM4 isoform alpha TRIM31 0.179 tripartite motif protein 31 TRIM53 0.177 tripartite motif-containing 53 LOC642425 0.177 tripartite motif-containing 53-like LOC642425 0.177 PREDICTED: tripartite motif-containing 53-like [Hom... LOC340970 0.175 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.175 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.172 PREDICTED: similar to tripartite motif-containing 5... TRIM26 0.172 tripartite motif-containing 26 SPRYD5 0.172 SPRY domain containing 5 TRIM68 0.172 ring finger protein 137 LOC729384 0.170 hypothetical protein LOC729384 LOC100134006 0.170 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.170 PREDICTED: similar to ring finger protein 18 LOC100131392 0.170 PREDICTED: similar to ring finger protein 18 LOC120824 0.170 PREDICTED: similar to hCG1802386 LOC120824 0.170 PREDICTED: similar to hCG1802386 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.