LOC340970 20235

Name: LOC340970	Sequence: fasta or formatted (283aa)		NCBI GI: 239750040
Description: PREDICTED: similar to tripartite motif-containing 53		Not currently referenced in the text
Other entries for this name: alt prot {283aa} PREDICTED: similar to tripartite motif-containing 53 alt mRNA {283aa} PREDICTED: similar to tripartite motif-containing 53
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 13 2 C cysteine 4.6 13 1 D aspartate 3.2 9 1 E glutamate 9.9 28 3 F phenylalanine 4.2 12 1 G glycine 3.2 9 1 H histidine 6.4 18 2 I isoleucine 4.6 13 1 K lysine 8.5 24 3 L leucine 12.0 34 2 M methionine 5.3 15 1 N asparagine 3.5 10 1 P proline 3.2 9 1 Q glutamine 4.2 12 1 R arginine 6.4 18 2 S serine 5.7 16 3 T threonine 3.5 10 2 V valine 2.8 8 1 W tryptophan 2.1 6 1 Y tyrosine 2.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to tripartite motif-containing 5... LOC340970 1.000 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.986 PREDICTED: similar to tripartite motif-containing 5... TRIM53 0.948 tripartite motif-containing 53 LOC642425 0.948 tripartite motif-containing 53-like LOC642425 0.948 PREDICTED: tripartite motif-containing 53-like [Hom... LOC729384 0.878 hypothetical protein LOC729384 LOC100134006 0.878 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.878 PREDICTED: similar to ring finger protein 18 LOC100131392 0.878 PREDICTED: similar to ring finger protein 18 LOC399939 0.878 PREDICTED: similar to ring finger protein 18 LOC653111 0.864 PREDICTED: similar to ring finger protein 18 TRIM49 0.864 ring finger protein 18 LOC283116 0.845 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.845 PREDICTED: similar to ring finger protein 18 LOC283116 0.845 PREDICTED: similar to ring finger protein 18 LOC283116 0.818 PREDICTED: similar to ring finger protein 18 isofor... LOC120824 0.716 PREDICTED: similar to hCG1802386 LOC120824 0.714 PREDICTED: similar to hCG1802386 SPRYD5 0.712 SPRY domain containing 5 LOC120824 0.712 PREDICTED: similar to hCG1802386 TRIM43 0.543 tripartite motif-containing 43 TRIM48 0.524 tripartite motif-containing 48 LOC653192 0.520 PREDICTED: Tripartite motif-containing protein 43-li... LOC652859 0.438 PREDICTED: similar to Tripartite motif-containing pr... LOC642446 0.403 PREDICTED: tripartite motif-containing protein 64B-... TRIM64 0.401 tripartite motif-containing 64 LOC646754 0.382 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.382 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.382 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.