TRIM53 14604

Name: TRIM53	Sequence: fasta or formatted (285aa)		NCBI GI: 223468632
Description: tripartite motif-containing 53		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 13 2 C cysteine 4.6 13 1 D aspartate 3.5 10 1 E glutamate 9.5 27 3 F phenylalanine 4.2 12 1 G glycine 3.2 9 1 H histidine 6.0 17 2 I isoleucine 5.6 16 1 K lysine 7.4 21 3 L leucine 11.6 33 2 M methionine 4.9 14 1 N asparagine 3.9 11 1 P proline 3.2 9 1 Q glutamine 5.3 15 1 R arginine 6.7 19 2 S serine 6.0 17 3 T threonine 3.9 11 2 V valine 2.1 6 1 W tryptophan 2.1 6 1 Y tyrosine 2.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 53 LOC642425 1.000 tripartite motif-containing 53-like LOC642425 1.000 PREDICTED: tripartite motif-containing 53-like [Hom... LOC340970 0.941 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.941 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.941 PREDICTED: similar to tripartite motif-containing 5... LOC729384 0.906 hypothetical protein LOC729384 LOC100134006 0.906 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.906 PREDICTED: similar to ring finger protein 18 LOC100131392 0.906 PREDICTED: similar to ring finger protein 18 LOC399939 0.906 PREDICTED: similar to ring finger protein 18 LOC653111 0.884 PREDICTED: similar to ring finger protein 18 TRIM49 0.884 ring finger protein 18 LOC283116 0.858 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.858 PREDICTED: similar to ring finger protein 18 LOC283116 0.858 PREDICTED: similar to ring finger protein 18 LOC283116 0.821 PREDICTED: similar to ring finger protein 18 isofor... SPRYD5 0.721 SPRY domain containing 5 LOC120824 0.709 PREDICTED: similar to hCG1802386 LOC120824 0.707 PREDICTED: similar to hCG1802386 LOC120824 0.705 PREDICTED: similar to hCG1802386 TRIM43 0.542 tripartite motif-containing 43 TRIM48 0.537 tripartite motif-containing 48 LOC653192 0.525 PREDICTED: Tripartite motif-containing protein 43-li... LOC652859 0.442 PREDICTED: similar to Tripartite motif-containing pr... LOC642446 0.393 PREDICTED: tripartite motif-containing protein 64B-... TRIM64 0.393 tripartite motif-containing 64 LOC646754 0.371 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.371 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.371 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.