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Search of human proteins with 6005952
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6005952 xylosylprotein beta 1,4-galactosyltransferase 7
[Homo sapiens]
(327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005952 xylosylprotein beta 1,4-galactosyltransferase 7 [Homo... 693 0.0
gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... 129 5e-30
gi|190570165 beta-1,4-galactosyltransferase 6 [Homo sapiens] 125 7e-29
gi|4757828 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ... 125 7e-29
gi|4502349 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ... 119 5e-27
gi|47078258 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4... 112 6e-25
gi|9994175 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ... 112 6e-25
gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2... 109 3e-24
gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ... 109 3e-24
gi|13540580 family with sequence similarity 49, member A [Homo s... 36 0.041
gi|13540527 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 33 0.35
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 32 0.77
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 32 0.77
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 32 0.77
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 32 0.77
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 32 0.77
gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens] 32 1.0
gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 31 1.3
gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 31 1.3
gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 31 1.3
gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap... 30 2.2
gi|109689723 abl interactor 2 [Homo sapiens] 30 2.9
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 30 3.8
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 30 3.8
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 30 3.8
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 30 3.8
gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens] 29 5.0
gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo ... 29 5.0
gi|66882532 farnesyltransferase, CAAX box, alpha isoform c [Homo... 29 5.0
gi|169234951 coiled-coil domain containing 17 [Homo sapiens] 29 5.0
>gi|6005952 xylosylprotein beta 1,4-galactosyltransferase 7 [Homo
sapiens]
Length = 327
Score = 693 bits (1788), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA 60
MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA
Sbjct: 1 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA 60
Query: 61 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS 120
VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS
Sbjct: 61 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS 120
Query: 121 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA 180
RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA
Sbjct: 121 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA 180
Query: 181 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL 240
GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL
Sbjct: 181 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL 240
Query: 241 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL 300
QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL
Sbjct: 241 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL 300
Query: 301 SVGGAPCTVLNIMLDCDKTATPWCTFS 327
SVGGAPCTVLNIMLDCDKTATPWCTFS
Sbjct: 301 SVGGAPCTVLNIMLDCDKTATPWCTFS 327
>gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1,
membrane-bound form [Homo sapiens]
Length = 398
Score = 129 bits (323), Expect = 5e-30
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 9/208 (4%)
Query: 92 PHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLE 151
PH++A+++PFR R E L ++ ++ L R+++ + IYV+NQ FNRA L+NVGF E
Sbjct: 175 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQE 234
Query: 152 SSNSTDY--IAMHDVDLLPLNEELDYG-FPEAGPFHVASPELHPLYHYKTYVGGILLLSK 208
+ DY DVDL+P+N+ Y F + VA + Y Y GG+ LSK
Sbjct: 235 ALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSK 294
Query: 209 QHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQ 268
Q + NG N +WGWG EDD+ + R+ G+ + RP+ + + RH D Q
Sbjct: 295 QQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQ 354
Query: 269 K--RIAAQKQEQFKVDREGGLNTVKYHV 294
+ RIA K+ GLN++ Y V
Sbjct: 355 RFDRIAHTKETML----SDGLNSLTYQV 378
>gi|190570165 beta-1,4-galactosyltransferase 6 [Homo sapiens]
Length = 382
Score = 125 bits (313), Expect = 7e-29
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 80 PPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRF 139
P HW ++AVL+PFR R E L +F H+ L ++++ YV+ Q F
Sbjct: 143 PGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQPF 202
Query: 140 NRAALINVGFLESSNST--DYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLY--H 195
NRA L NVGF E+ + D + HDVD LP N+ YG E P H A+ +Y
Sbjct: 203 NRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEM-PRHFAAKLDKYMYILP 261
Query: 196 YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTF 255
YK + GG+ L+ + +R NG N FWGWG EDD+ + R+ AG + RP G YK+
Sbjct: 262 YKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSI 321
Query: 256 RHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKY 292
H H + + ++ +E+ +D GLN + Y
Sbjct: 322 PHHHRGEVQFLGRYKLLRYSKERQYID---GLNNLIY 355
>gi|4757828 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5
[Homo sapiens]
Length = 388
Score = 125 bits (313), Expect = 7e-29
Identities = 73/214 (34%), Positives = 112/214 (52%), Gaps = 8/214 (3%)
Query: 83 HWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRA 142
HW+ ++A+L+PFR R E L V H+ L R++++ YV+ QV FNRA
Sbjct: 152 HWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRLQFAFYVVEQVGTQPFNRA 211
Query: 143 ALINVGFLESSNSTDY--IAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLY--HYKT 198
L NVGF E+ D+ + HDVD +P ++ YG + P H A+ +Y Y
Sbjct: 212 MLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQM-PRHFATKLDKYMYLLPYTE 270
Query: 199 YVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHL 258
+ GG+ L+ + +R NG N FWGWG EDD+ + R++ AG + RP G T YK+ H
Sbjct: 271 FFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYSVSRPEGDTGKYKSIPHH 330
Query: 259 HDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKY 292
H + + + + +E+ +D GLN + Y
Sbjct: 331 HRGEVQFLGRYALLRKSKERQGLD---GLNNLNY 361
>gi|4502349 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3
[Homo sapiens]
Length = 393
Score = 119 bits (297), Expect = 5e-27
Identities = 71/209 (33%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 94 RLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLES- 152
R A++VP R R L + + H+ FL R+++ + IYV++Q + FNRA L+NVG E+
Sbjct: 124 RTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGNGTFNRAKLLNVGVREAL 183
Query: 153 -SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLYH--YKTYVGGILLLSKQ 209
D + +HDVDLLP N+ Y GP HVA Y Y Y GG+ L+
Sbjct: 184 RDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSLPYPQYFGGVSALTPD 243
Query: 210 HYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQK 269
Y NG N +WGWG EDD+ R++ AG+++ RP YK +H D + +
Sbjct: 244 QYLKMNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGNEENPHR 303
Query: 270 -RIAAQKQEQFKVDREGGLNTVKYHVASR 297
+ + Q + D G+N++ Y + +R
Sbjct: 304 FDLLVRTQNSWTQD---GMNSLTYQLLAR 329
>gi|47078258 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4
[Homo sapiens]
Length = 344
Score = 112 bits (279), Expect = 6e-25
Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 7/207 (3%)
Query: 94 RLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLES- 152
R+A+LVP R R + L+ + H+ FL R+++ + IYV++Q + +FNRA L+NVG+LE+
Sbjct: 123 RVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLEAL 182
Query: 153 -SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQ 209
+ D HDVDL+P N+ Y E P H+ Y Y Y GG+ LS++
Sbjct: 183 KEENWDCFIFHDVDLVPENDFNLYKC-EEHPKHLVVGRNSTGYRLRYSGYFGGVTALSRE 241
Query: 210 HYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQK 269
+ NG SN +WGWG EDD+ R++ +++ RP Y H D + + +
Sbjct: 242 QFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKG-NEVNAE 300
Query: 270 RIAAQKQEQFKVDREGGLNTVKYHVAS 296
R+ Q +V R GL++ Y + S
Sbjct: 301 RMKLLHQVS-RVWRTDGLSSCSYKLVS 326
>gi|9994175 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4
[Homo sapiens]
Length = 344
Score = 112 bits (279), Expect = 6e-25
Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 7/207 (3%)
Query: 94 RLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLES- 152
R+A+LVP R R + L+ + H+ FL R+++ + IYV++Q + +FNRA L+NVG+LE+
Sbjct: 123 RVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLEAL 182
Query: 153 -SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQ 209
+ D HDVDL+P N+ Y E P H+ Y Y Y GG+ LS++
Sbjct: 183 KEENWDCFIFHDVDLVPENDFNLYKC-EEHPKHLVVGRNSTGYRLRYSGYFGGVTALSRE 241
Query: 210 HYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQK 269
+ NG SN +WGWG EDD+ R++ +++ RP Y H D + + +
Sbjct: 242 QFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKG-NEVNAE 300
Query: 270 RIAAQKQEQFKVDREGGLNTVKYHVAS 296
R+ Q +V R GL++ Y + S
Sbjct: 301 RMKLLHQVS-RVWRTDGLSSCSYKLVS 326
>gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 109 bits (273), Expect = 3e-24
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 95 LAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSN 154
+AV++PFR R L ++ ++ L R+++R+ +YV+NQ FNRA L+NVGFLE+
Sbjct: 145 VAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYVINQHGEDTFNRAKLLNVGFLEALK 204
Query: 155 ST---DYIAMHDVDLLPLNEELDYGF-PEAGPFHVASPELHPLYHYKTYVGGILLLSKQH 210
D DVDL+P+++ Y + F +A + Y Y GG+ LSK
Sbjct: 205 EDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKAQ 264
Query: 211 YRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKR 270
+ NG N +WGWG EDD+ + RI G+++ RP Y+ +H D + + +R
Sbjct: 265 FLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYRMIKHDRD-KHNEPNPQR 323
Query: 271 IAAQKQEQFKVDREGGLNTVKYHV 294
+ + + R+ G+ +V+Y V
Sbjct: 324 FTKIQNTKLTMKRD-GIGSVRYQV 346
>gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 109 bits (273), Expect = 3e-24
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 95 LAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSN 154
+AV++PFR R L ++ ++ L R+++R+ +YV+NQ FNRA L+NVGFLE+
Sbjct: 145 VAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYVINQHGEDTFNRAKLLNVGFLEALK 204
Query: 155 ST---DYIAMHDVDLLPLNEELDYGF-PEAGPFHVASPELHPLYHYKTYVGGILLLSKQH 210
D DVDL+P+++ Y + F +A + Y Y GG+ LSK
Sbjct: 205 EDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKAQ 264
Query: 211 YRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKR 270
+ NG N +WGWG EDD+ + RI G+++ RP Y+ +H D + + +R
Sbjct: 265 FLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYRMIKHDRD-KHNEPNPQR 323
Query: 271 IAAQKQEQFKVDREGGLNTVKYHV 294
+ + + R+ G+ +V+Y V
Sbjct: 324 FTKIQNTKLTMKRD-GIGSVRYQV 346
>gi|13540580 family with sequence similarity 49, member A [Homo
sapiens]
Length = 323
Score = 36.2 bits (82), Expect = 0.041
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 12/111 (10%)
Query: 75 CPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVP-------HMRRFLSRKKIRH- 126
CPP P +H E + + A ++ F RF+EL + P + RR +SR +I +
Sbjct: 112 CPPYTPTQHLEREQALA-KEFAEILHFTLRFDELKMRNPAIQNDFSYYRRTISRNRINNM 170
Query: 127 HIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVD---LLPLNEELD 174
H+ + N+V++ NR +L + MH V LP+ D
Sbjct: 171 HLDIENEVNNEMANRMSLFYAEATPMLKTLSNATMHFVSENKTLPIENTTD 221
>gi|13540527 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 4 [Homo
sapiens]
Length = 378
Score = 33.1 bits (74), Expect = 0.35
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 1 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA 60
M P + AA GRSGLL G C + L +SL L L C + +A
Sbjct: 1 MLPPQPSAAH-QGRGGRSGLLPKGPAMLCRLCWLVS-------YSLAVLLLGCLLFLRKA 52
Query: 61 VRGQGQETSGPPRACPPEP-----PPEHWEEDASWG-PHRLAVLVPFR 102
+ G T+ P PP P PP H AS P R + + +R
Sbjct: 53 AKPAGDPTAHQPFWAPPTPRHSRCPPNHTVSSASLSLPSRHRLFLTYR 100
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 32.0 bits (71), Expect = 0.77
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 48 WLQLSCS---GDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRER 104
W + SC+ G A RG G + P PP+ P W PH + L P + R
Sbjct: 159 WARRSCALRRGGAASWRRGPGTPAAAPEAPSPPDHSPSPWTSRCPPCPHASSFLPPGQSR 218
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 32.0 bits (71), Expect = 0.77
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 48 WLQLSCS---GDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRER 104
W + SC+ G A RG G + P PP+ P W PH + L P + R
Sbjct: 159 WARRSCALRRGGAASWRRGPGTPAAAPEAPSPPDHSPSPWTSRCPPCPHASSFLPPGQSR 218
>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 32.0 bits (71), Expect = 0.77
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 48 WLQLSCS---GDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRER 104
W + SC+ G A RG G + P PP+ P W PH + L P + R
Sbjct: 159 WARRSCALRRGGAASWRRGPGTPAAAPEAPSPPDHSPSPWTSRCPPCPHASSFLPPGQSR 218
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 32.0 bits (71), Expect = 0.77
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 196 YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTF 255
++ Y GI + K G GWG ED + + ++ AGL+ FR +
Sbjct: 688 WRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGV----- 742
Query: 256 RHLHDPAW 263
H+H P +
Sbjct: 743 VHVHHPVF 750
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 32.0 bits (71), Expect = 0.77
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Query: 196 YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTF 255
++ Y GI + K G GWG ED + Y ++ +GL+ FR + + F
Sbjct: 775 WRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQEVGVVH-IF 833
Query: 256 RHLH-DPAWRKRDQKRIAAQKQEQF 279
+H DP + K K F
Sbjct: 834 HPVHCDPNLDPKQYKMCLGSKASTF 858
>gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens]
Length = 1507
Score = 31.6 bits (70), Expect = 1.0
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 48 WLQLSCSGDVARAVRGQGQETSGPPRACPPEPPP 81
W+ S SG RA R G S PPR P PPP
Sbjct: 66 WISRSRSGIALRAARPPG---SSPPRPAAPRPPP 96
>gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 31.2 bits (69), Expect = 1.3
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 62 RGQGQETSGPPRACPPEPPPE-HWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRR-FL 119
R ++ SGPP P PP + W+ D P +L L P E LLV R L
Sbjct: 246 RSHKRKLSGPPLQLQPTPPLQLRWDRDEGPPPAKLPCLSP-----EALLVGQASQREGHL 300
Query: 120 SRKKIRHHIYVLNQVDHFRFNRAAL 144
+ + ++ VL++ FR R L
Sbjct: 301 QQGNMHKNMRVLSRTSKFRRLRQLL 325
>gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 31.2 bits (69), Expect = 1.3
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 62 RGQGQETSGPPRACPPEPPPE-HWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRR-FL 119
R ++ SGPP P PP + W+ D P +L L P E LLV R L
Sbjct: 246 RSHKRKLSGPPLQLQPTPPLQLRWDRDEGPPPAKLPCLSP-----EALLVGQASQREGHL 300
Query: 120 SRKKIRHHIYVLNQVDHFRFNRAAL 144
+ + ++ VL++ FR R L
Sbjct: 301 QQGNMHKNMRVLSRTSKFRRLRQLL 325
>gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 31.2 bits (69), Expect = 1.3
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 62 RGQGQETSGPPRACPPEPPPE-HWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRR-FL 119
R ++ SGPP P PP + W+ D P +L L P E LLV R L
Sbjct: 246 RSHKRKLSGPPLQLQPTPPLQLRWDRDEGPPPAKLPCLSP-----EALLVGQASQREGHL 300
Query: 120 SRKKIRHHIYVLNQVDHFRFNRAAL 144
+ + ++ VL++ FR R L
Sbjct: 301 QQGNMHKNMRVLSRTSKFRRLRQLL 325
>gi|167614500 lymphocyte-activation protein 3 precursor [Homo
sapiens]
Length = 525
Score = 30.4 bits (67), Expect = 2.2
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 61 VRGQGQETSGPPRACPPEP--PPEHWEEDASWGP 92
V Q Q SGPP A P P P H +SWGP
Sbjct: 61 VTWQHQPDSGPPAAAPGHPLAPGPHPAAPSSWGP 94
>gi|109689723 abl interactor 2 [Homo sapiens]
Length = 475
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 17/106 (16%)
Query: 50 QLSCSGDVARAVRGQGQETSGPP--------RACPPEPPPEHWEEDASWGPHRLAVLVPF 101
QL G VAR PP + PP PPPE +EE+ A +V +
Sbjct: 346 QLPLMGFVARVQENISDTPPPPPPVEEPVFDESPPPPPPPEDYEEEE-------AAVVEY 398
Query: 102 RERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINV 147
+ + E P R K + + Y ++ D F A+I V
Sbjct: 399 SDPYAE--EDPPWAPRSYLEKVVAIYDYTKDKEDELSFQEGAIIYV 442
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 71 PPRACPPEPPPEH--WEEDASWG---PHRLAVLVPFRERF 105
PP PP PPP H +++ SWG PH L F F
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHF 164
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 71 PPRACPPEPPPEH--WEEDASWG---PHRLAVLVPFRERF 105
PP PP PPP H +++ SWG PH L F F
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHF 164
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 71 PPRACPPEPPPEH--WEEDASWG---PHRLAVLVPFRERF 105
PP PP PPP H +++ SWG PH L F F
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHF 164
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 71 PPRACPPEPPPEH--WEEDASWG---PHRLAVLVPFRERF 105
PP PP PPP H +++ SWG PH L F F
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHF 164
>gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens]
Length = 218
Score = 29.3 bits (64), Expect = 5.0
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 11/43 (25%)
Query: 39 LSLGFFSLLWLQLSCSGDVARAVRGQGQETSGPPRACPPEPPP 81
L+ GFF+ L ++L CS + ++S P RACP PPP
Sbjct: 141 LASGFFARL-VELFCSRE----------DSSRPSRACPGSPPP 172
>gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo
sapiens]
Length = 218
Score = 29.3 bits (64), Expect = 5.0
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 11/43 (25%)
Query: 39 LSLGFFSLLWLQLSCSGDVARAVRGQGQETSGPPRACPPEPPP 81
L+ GFF+ L ++L CS + ++S P RACP PPP
Sbjct: 141 LASGFFARL-VELFCSRE----------DSSRPSRACPGSPPP 172
>gi|66882532 farnesyltransferase, CAAX box, alpha isoform c [Homo
sapiens]
Length = 312
Score = 29.3 bits (64), Expect = 5.0
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 51 LSCSGDVARAVRG--QGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEEL 108
++ + V A +G GQ PP+ PP P +H EE A+ AV P + F L
Sbjct: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGE--AVASPMDDGFVSL 58
Query: 109 ----LVFVPHMRRFL 119
V H RR L
Sbjct: 59 DSPSYVLYRHFRRVL 73
>gi|169234951 coiled-coil domain containing 17 [Homo sapiens]
Length = 590
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 45 SLLWLQLSCSGDVARAVRGQGQETSGPPRACPPEPP 80
S +W+QL +AR R G+ T+ PP C P PP
Sbjct: 379 SWIWVQLRTG--LARDGRDTGRTTALPPALCLPPPP 412
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,664,623
Number of Sequences: 37866
Number of extensions: 731127
Number of successful extensions: 4259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4209
Number of HSP's gapped (non-prelim): 49
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.