Guide to the Human Genome
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Name: B4GALT1 Sequence: fasta or formatted (398aa) NCBI GI: 13929462
Description:

UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1, membrane-bound form

Referenced in:

Galactose and Lactose
Protein Glycosylation
Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         26           3
 C cysteine            1.8          7           1
 D aspartate           5.3         21           3
 E glutamate           2.8         11           2
 F phenylalanine       3.8         15           1
 G glycine             8.3         33           2
 H histidine           2.3          9           1
 I isoleucine          4.3         17           3
 K lysine              2.8         11           2
 L leucine            10.6         42           2
 M methionine          2.5         10           1
 N asparagine          4.8         19           2
 P proline             8.5         34           4
 Q glutamine           5.0         20           2
 R arginine            6.8         27           1
 S serine              7.8         31           2
 T threonine           3.8         15           2
 V valine              7.5         30           2
 W tryptophan          0.8          3           1
 Y tyrosine            4.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... 
B4GALT2               0.475   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2...
B4GALT2               0.475   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ...
B4GALT3               0.384   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ...
B4GALT4               0.322   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4...
B4GALT4               0.322   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
B4GALT5               0.271   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ...
B4GALT6               0.254   beta-1,4-galactosyltransferase 6 
B4GALT7               0.131   xylosylprotein beta 1,4-galactosyltransferase 7 [Homo...
ARID3C                0.018   AT rich interactive domain 3C (BRIGHT- like) 
CHSY1                 0.016   chondroitin sulfate synthase 1 
CHSY3                 0.015   chondroitin sulfate synthase 3 
GBF1                  0.015   golgi-specific brefeldin A resistant guanine nucleoti...
TMEM55B               0.015   transmembrane protein 55B isoform 2 
CASKIN2               0.015   cask-interacting protein 2 isoform b 
CASKIN2               0.015   cask-interacting protein 2 isoform a 
CRTC1                 0.014   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.014   mucoepidermoid carcinoma translocated 1 isoform 1 [...
RALGDS                0.014   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.014   ral guanine nucleotide dissociation stimulator isof...
C6orf174              0.013   hypothetical protein LOC387104 
HIVEP3                0.013   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.013   human immunodeficiency virus type I enhancer bindin...
RANBP9                0.013   RAN binding protein 9 
KCNA5                 0.013   potassium voltage-gated channel, shaker-related subf...
VPS37C                0.013   vacuolar protein sorting 37C 
MUC4                  0.011   mucin 4 isoform a 
SALL3                 0.011   sal-like 3 
DAZAP2                0.011   DAZ associated protein 2 isoform a 
BRD3                  0.011   bromodomain containing protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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