Guide to the Human Genome
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Name: B4GALT7 Sequence: fasta or formatted (327aa) NCBI GI: 6005952
Description:

xylosylprotein beta 1,4-galactosyltransferase 7

Referenced in:

Galactose and Lactose
Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         21           2
 C cysteine            2.4          8           1
 D aspartate           4.6         15           2
 E glutamate           5.5         18           2
 F phenylalanine       6.1         20           2
 G glycine             8.0         26           2
 H histidine           4.6         15           2
 I isoleucine          2.8          9           1
 K lysine              4.3         14           2
 L leucine            11.0         36           3
 M methionine          1.5          5           1
 N asparagine          2.8          9           1
 P proline             6.7         22           3
 Q glutamine           3.4         11           1
 R arginine            8.6         28           2
 S serine              6.4         21           2
 T threonine           3.7         12           2
 V valine              5.8         19           1
 W tryptophan          2.4          8           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   xylosylprotein beta 1,4-galactosyltransferase 7 [Homo... 
B4GALT1               0.156   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1...
B4GALT6               0.150   beta-1,4-galactosyltransferase 6 
B4GALT5               0.150   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ...
B4GALT3               0.141   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ...
B4GALT4               0.130   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4...
B4GALT4               0.130   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
B4GALT2               0.126   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2...
B4GALT2               0.126   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ...
FAM49A                0.016   family with sequence similarity 49, member A 
B3GNT4                0.012   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
LOC100132891          0.010   PREDICTED: hypothetical protein 
LOC100132891          0.010   PREDICTED: hypothetical protein 
LOC100132891          0.010   PREDICTED: hypothetical protein 
CHSY1                 0.010   chondroitin sulfate synthase 1 
CHSY3                 0.010   chondroitin sulfate synthase 3 
PRDM15                0.010   PR domain containing 15 isoform 1 
LOC100129307          0.009   PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...
LOC100129307          0.009   PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...
LOC100129307          0.009   PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...
LAG3                  0.007   lymphocyte-activation protein 3 precursor 
ABI2                  0.007   abl interactor 2 
WT1                   0.007   Wilms tumor 1 isoform D 
WT1                   0.007   Wilms tumor 1 isoform C 
WT1                   0.007   Wilms tumor 1 isoform B 
WT1                   0.007   Wilms tumor 1 isoform A 
LOC100292964          0.006   PREDICTED: similar to BCL2-like 12 
LOC100290718          0.006   PREDICTED: hypothetical protein XP_002346597 
FNTA                  0.006   farnesyltransferase, CAAX box, alpha isoform c [Homo...
CCDC17                0.006   coiled-coil domain containing 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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