Guide to the Human Genome
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Name: B3GNT4 Sequence: fasta or formatted (378aa) NCBI GI: 13540527
Description:

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         32           2
 C cysteine            2.6         10           1
 D aspartate           5.0         19           3
 E glutamate           2.9         11           1
 F phenylalanine       4.8         18           2
 G glycine             7.7         29           4
 H histidine           3.7         14           2
 I isoleucine          2.6         10           1
 K lysine              3.2         12           1
 L leucine            14.3         54           3
 M methionine          2.6         10           1
 N asparagine          1.6          6           1
 P proline             9.0         34           2
 Q glutamine           3.4         13           1
 R arginine            8.2         31           2
 S serine              5.6         21           2
 T threonine           3.7         14           1
 V valine              5.8         22           2
 W tryptophan          2.4          9           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 
B3GNT7                0.321   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT6                0.317   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT3                0.299   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT9                0.286   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT2                0.279   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GNT8                0.201   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT5                0.168   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT1               0.163   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALT2               0.151   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [...
LOC100289720          0.149   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.149   PREDICTED: hypothetical protein XP_002342992 
B3GALT5               0.146   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.146   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.146   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.146   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.146   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GALT4               0.132   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
B3GALT6               0.051   beta-1,3-galactosyltransferase 6 
B3GALNT2              0.030   beta-1,3-N-acetylgalactosaminyltransferase 2 
B3GALTL               0.026   beta 1,3-galactosyltransferase-like 
C1GALT1               0.018   core 1 synthase, glycoprotein-N-acetylgalactosamine 3...
CHSY3                 0.013   chondroitin sulfate synthase 3 
B4GALT7               0.010   xylosylprotein beta 1,4-galactosyltransferase 7 [Homo...
LOC100132891          0.009   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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