Guide to the Human Genome
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Name: B4GALT2 Sequence: fasta or formatted (372aa) NCBI GI: 53759113
Description:

UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2

Referenced in:

Galactose and Lactose
Protein Glycosylation

Other entries for this name:
alt mRNA [372aa] UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         23           2
 C cysteine            1.9          7           1
 D aspartate           5.4         20           3
 E glutamate           3.5         13           1
 F phenylalanine       5.4         20           2
 G glycine             7.8         29           2
 H histidine           3.5         13           2
 I isoleucine          5.1         19           2
 K lysine              3.0         11           1
 L leucine            10.2         38           3
 M methionine          2.2          8           1
 N asparagine          3.8         14           1
 P proline             8.9         33           2
 Q glutamine           3.0         11           1
 R arginine            9.1         34           2
 S serine              6.7         25           7
 T threonine           4.0         15           1
 V valine              5.6         21           1
 W tryptophan          1.1          4           1
 Y tyrosine            3.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2... 
B4GALT2               1.000   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ...
B4GALT1               0.501   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1...
B4GALT3               0.391   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ...
B4GALT4               0.343   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4...
B4GALT4               0.343   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
B4GALT6               0.273   beta-1,4-galactosyltransferase 6 
B4GALT5               0.273   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ...
B4GALT7               0.112   xylosylprotein beta 1,4-galactosyltransferase 7 [Homo...
CHSY1                 0.031   chondroitin sulfate synthase 1 
CHSY3                 0.020   chondroitin sulfate synthase 3 
GRID2IP               0.019   glutamate receptor, ionotropic, delta 2 (Grid2) int...
FOXD3                 0.017   forkhead box D3 
SRRM2                 0.017   splicing coactivator subunit SRm300 
LOC100292845          0.016   PREDICTED: hypothetical protein 
LOC100289230          0.016   PREDICTED: hypothetical protein XP_002342600 
ABI1                  0.015   abl-interactor 1 isoform d 
ABI1                  0.015   abl-interactor 1 isoform c 
ABI1                  0.015   abl-interactor 1 isoform b 
SALL3                 0.015   sal-like 3 
NACA                  0.015   nascent polypeptide-associated complex alpha subuni...
B4GALNT4              0.013   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
BRD3                  0.013   bromodomain containing protein 3 
MAP7D1                0.013   MAP7 domain containing 1 
PCBP4                 0.013   poly(rC) binding protein 4 isoform a 
PCBP4                 0.013   poly(rC) binding protein 4 isoform c 
PCBP4                 0.013   poly(rC) binding protein 4 isoform c 
GRIN2D                0.013   N-methyl-D-aspartate receptor subunit 2D precursor ...
ATN1                  0.013   atrophin-1 
ATN1                  0.013   atrophin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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