Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: B4GALT4 Sequence: fasta or formatted (344aa) NCBI GI: 47078258
Description:

UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4

Referenced in:

Galactose and Lactose
Protein Glycosylation

Other entries for this name:
alt mRNA [344aa] UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         14           1
 C cysteine            1.7          6           1
 D aspartate           3.8         13           3
 E glutamate           7.0         24           2
 F phenylalanine       5.5         19           2
 G glycine             6.7         23           2
 H histidine           3.8         13           1
 I isoleucine          3.2         11           1
 K lysine              7.3         25           2
 L leucine            12.5         43           5
 M methionine          1.7          6           1
 N asparagine          5.8         20           2
 P proline             3.8         13           1
 Q glutamine           3.5         12           2
 R arginine            6.4         22           1
 S serine              4.9         17           2
 T threonine           4.4         15           1
 V valine              7.6         26           2
 W tryptophan          1.7          6           1
 Y tyrosine            4.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4... 
B4GALT4               1.000   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
B4GALT3               0.404   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ...
B4GALT2               0.374   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2...
B4GALT2               0.374   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ...
B4GALT1               0.371   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1...
B4GALT6               0.263   beta-1,4-galactosyltransferase 6 
B4GALT5               0.262   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ...
B4GALT7               0.126   xylosylprotein beta 1,4-galactosyltransferase 7 [Homo...
GALNT6                0.015   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
CHSY1                 0.015   chondroitin sulfate synthase 1 
GALNT3                0.013   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
CHSY3                 0.012   chondroitin sulfate synthase 3 
CSGALNACT2            0.010   chondroitin sulfate N-acetylgalactosaminyltransferas...
CSGALNACT1            0.010   chondroitin sulfate N-acetylgalactosaminyltransfera...
CSGALNACT1            0.010   chondroitin sulfate N-acetylgalactosaminyltransfera...
WNT7B                 0.010   wingless-type MMTV integration site family, member 7...
TNFSF13B              0.007   tumor necrosis factor superfamily, member 13b isoform...
TNFSF13B              0.007   tumor necrosis factor superfamily, member 13b isofo...
DDX47                 0.007   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
PCDHB15               0.007   protocadherin beta 15 precursor 
WNT16                 0.006   wingless-type MMTV integration site family, member 1...
WNT16                 0.006   wingless-type MMTV integration site family, member 1...
GALNTL6               0.004   N-acetylgalactosaminyltransferase-like 6 
UPF3B                 0.004   UPF3 regulator of nonsense transcripts homolog B iso...
GALNT10               0.004   GalNAc transferase 10 isoform a 
UPF3B                 0.004   UPF3 regulator of nonsense transcripts homolog B iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press