Guide to the Human Genome
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Name: ABI2 Sequence: fasta or formatted (475aa) NCBI GI: 109689723
Description:

abl interactor 2

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         25           2
 C cysteine            0.2          1           1
 D aspartate           4.0         19           2
 E glutamate           6.9         33           4
 F phenylalanine       1.7          8           1
 G glycine             5.9         28           2
 H histidine           1.9          9           1
 I isoleucine          5.3         25           2
 K lysine              3.4         16           2
 L leucine             5.7         27           2
 M methionine          2.7         13           1
 N asparagine          5.1         24           2
 P proline            12.8         61           7
 Q glutamine           4.6         22           2
 R arginine            5.9         28           2
 S serine             10.3         49           3
 T threonine           6.1         29           2
 V valine              6.9         33           2
 W tryptophan          0.4          2           1
 Y tyrosine            4.8         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abl interactor 2 
ABI1                  0.721   abl-interactor 1 isoform d 
ABI1                  0.719   abl-interactor 1 isoform b 
ABI1                  0.707   abl-interactor 1 isoform a 
ABI1                  0.662   abl-interactor 1 isoform c 
ABI3                  0.262   NESH protein isoform 1 
ABI3                  0.252   NESH protein isoform 2 
ITSN2                 0.048   intersectin 2 isoform 3 
ITSN2                 0.048   intersectin 2 isoform 1 
ITSN2                 0.048   intersectin 2 isoform 2 
HCLS1                 0.046   hematopoietic cell-specific Lyn substrate 1 
ITSN1                 0.041   intersectin 1 isoform ITSN-s 
ITSN1                 0.041   intersectin 1 isoform ITSN-l 
SH3RF1                0.041   SH3 domain containing ring finger 1 
MYO1E                 0.040   myosin IE 
SORBS2                0.039   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.039   sorbin and SH3 domain containing 2 isoform 4 
SH3RF3                0.039   SH3 domain containing ring finger 3 
CTTN                  0.037   cortactin isoform a 
CTTN                  0.037   cortactin isoform b 
MYO1F                 0.037   myosin IF 
WIPF2                 0.037   WIRE protein 
ASAP1                 0.036   development and differentiation enhancing factor 1 [...
SH3D19                0.036   SH3 domain containing 19 isoform c 
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform c [Hom...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform b [Homo...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform a 
LASP1                 0.035   LIM and SH3 protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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