Search of human proteins with 5901954

Search of human proteins with 5901954

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5901954 FGFR1 oncogene partner isoform a [Homo sapiens]
         (399 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5901954 FGFR1 oncogene partner isoform a [Homo sapiens]            773   0.0  
gi|36287110 FGFR1 oncogene partner isoform b [Homo sapiens]           721   0.0  
gi|21389391 hypothetical protein LOC123811 [Homo sapiens]              46   7e-05
gi|224809302 xeroderma pigmentosum, complementation group C isof...    41   0.002
gi|224809295 xeroderma pigmentosum, complementation group C isof...    41   0.002
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]    36   0.070
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]               35   0.092
gi|157738619 smoothelin-like 1 [Homo sapiens]                          35   0.092
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora...    35   0.12 
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho...    34   0.20 
gi|5032055 reticulon 2 isoform A [Homo sapiens]                        34   0.20 
gi|46255005 reticulon 2 isoform B [Homo sapiens]                       34   0.20 
gi|150456424 RW1 protein [Homo sapiens]                                33   0.35 
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              33   0.45 
gi|109637769 calpastatin isoform k [Homo sapiens]                      33   0.59 
gi|109637765 calpastatin isoform i [Homo sapiens]                      33   0.59 
gi|109637763 calpastatin isoform h [Homo sapiens]                      33   0.59 
gi|109637757 calpastatin isoform e [Homo sapiens]                      33   0.59 
gi|27765085 calpastatin isoform b [Homo sapiens]                       33   0.59 
gi|109637753 calpastatin isoform a [Homo sapiens]                      33   0.59 
gi|148233596 LPS-responsive vesicle trafficking, beach and ancho...    33   0.59 
gi|47933392 cytohesin 1 interacting protein [Homo sapiens]             33   0.59 
gi|168229156 NFKB activating protein [Homo sapiens]                    32   0.78 
gi|21493045 A-kinase anchor protein 6 [Homo sapiens]                   32   1.0  
gi|94400925 synaptonemal complex protein 2-like [Homo sapiens]         32   1.0  
gi|18093112 ABT1-associated protein [Homo sapiens]                     32   1.0  
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [...    32   1.0  
gi|19923592 oxysterol binding protein-like 11 [Homo sapiens]           32   1.3  
gi|117190342 PHD finger protein 2 [Homo sapiens]                       32   1.3  
gi|59814411 hypothetical protein LOC253725 [Homo sapiens]              32   1.3  

>gi|5901954 FGFR1 oncogene partner isoform a [Homo sapiens]
          Length = 399

 Score =  773 bits (1997), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE 60
           MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE
Sbjct: 1   MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE 60

Query: 61  SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE 120
           SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE
Sbjct: 61  SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE 120

Query: 121 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQ 180
           GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQ
Sbjct: 121 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQ 180

Query: 181 GKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK 240
           GKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK
Sbjct: 181 GKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK 240

Query: 241 AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAP 300
           AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAP
Sbjct: 241 AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAP 300

Query: 301 SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE 360
           SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE
Sbjct: 301 SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE 360

Query: 361 EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA 399
           EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA
Sbjct: 361 EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA 399


>gi|36287110 FGFR1 oncogene partner isoform b [Homo sapiens]
          Length = 379

 Score =  721 bits (1860), Expect = 0.0
 Identities = 379/399 (94%), Positives = 379/399 (94%), Gaps = 20/399 (5%)

Query: 1   MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE 60
           MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE
Sbjct: 1   MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE 60

Query: 61  SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE 120
           SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE
Sbjct: 61  SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE 120

Query: 121 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQ 180
           GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSK       
Sbjct: 121 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSK------- 173

Query: 181 GKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK 240
                        KANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK
Sbjct: 174 -------------KANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK 220

Query: 241 AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAP 300
           AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAP
Sbjct: 221 AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAP 280

Query: 301 SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE 360
           SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE
Sbjct: 281 SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE 340

Query: 361 EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA 399
           EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA
Sbjct: 341 EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA 379


>gi|21389391 hypothetical protein LOC123811 [Homo sapiens]
          Length = 174

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 15  ELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDGRLV 74
           EL+ +L  TLE  GVL  +KA +RA VF AL++    E +  L +E+L          L+
Sbjct: 6   ELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDR--EPRPSLSHENL----------LI 53

Query: 75  ASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAEGTVGGPLLLEVI 132
             L+ E+L+F    +T +V   E+        R+ L  +L   E       PLL  ++
Sbjct: 54  NELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGIL 111


>gi|224809302 xeroderma pigmentosum, complementation group C isoform
           2 [Homo sapiens]
          Length = 903

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 8/176 (4%)

Query: 144 TGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSD 203
           + E +  + + H+ PK+ +G    +T      R   +GK+   G+K   K ++ E ++  
Sbjct: 309 SSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSSSEEDEGP 368

Query: 204 TSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEG---DSFFDDPI 260
                 E  ++   H    E ++ S +S +   G D+AG   D +   G   D   +D  
Sbjct: 369 G--DKQEKATQRRPH--GRERRVASRVSYKEESGSDEAGSGSDFELSSGEASDPSDEDSE 424

Query: 261 PKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKD 316
           P P K        R +AGS ++            SL  A S   S SKRG  +  D
Sbjct: 425 PGPPKQRKAPAPQRTKAGSKSASRTHRGSHRKDPSLPAASS-SSSSSKRGKKMCSD 479


>gi|224809295 xeroderma pigmentosum, complementation group C isoform
           1 [Homo sapiens]
          Length = 940

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 8/176 (4%)

Query: 144 TGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSD 203
           + E +  + + H+ PK+ +G    +T      R   +GK+   G+K   K ++ E ++  
Sbjct: 346 SSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSSSEEDEGP 405

Query: 204 TSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEG---DSFFDDPI 260
                 E  ++   H    E ++ S +S +   G D+AG   D +   G   D   +D  
Sbjct: 406 G--DKQEKATQRRPH--GRERRVASRVSYKEESGSDEAGSGSDFELSSGEASDPSDEDSE 461

Query: 261 PKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKD 316
           P P K        R +AGS ++            SL  A S   S SKRG  +  D
Sbjct: 462 PGPPKQRKAPAPQRTKAGSKSASRTHRGSHRKDPSLPAASS-SSSSSKRGKKMCSD 516


>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
          Length = 1301

 Score = 35.8 bits (81), Expect = 0.070
 Identities = 55/255 (21%), Positives = 85/255 (33%), Gaps = 31/255 (12%)

Query: 170 TPSKIPRYKGQGKKKTSGQKAG------------------DKKA--NDEANQSDTSVSLS 209
           T  ++   +G G+K   G K G                  D K+   D+ N SD S    
Sbjct: 416 TQGEVVNIEGPGQKSEPGNKVGHSNTGSDSNSDGYDSYDFDDKSMQGDDPNSSDESNGND 475

Query: 210 EPKSKSSLHLLSH-ETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDP--------I 260
           +  S+S  +  S  +    S  S    +G D  G   D+ D   D+   D          
Sbjct: 476 DANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGND 535

Query: 261 PKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLI 320
              +   G  K     + S  S + +    S  S  + + S  DS+S   ++        
Sbjct: 536 DNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDS 595

Query: 321 SDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLD--D 378
           SD   S       D     D + +S     S  S  +  + D   +  D N+SD  D  D
Sbjct: 596 SDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSD 655

Query: 379 LTQDLTVSQLSDVAD 393
            +     S  SD +D
Sbjct: 656 SSDSSNSSNSSDSSD 670



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 48/234 (20%), Positives = 76/234 (32%), Gaps = 3/234 (1%)

Query: 160 SPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHL 219
           S E K +   + SK    +      TS     D   N      D   S S      S   
Sbjct: 495 SDESKDNGNGSDSK--GAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDS 552

Query: 220 LSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGS 279
            S ++   S  S+ +      +    D D  + DS         + +          +  
Sbjct: 553 DSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSD 612

Query: 280 LASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVD 339
            +  SD+   KS  S      S  DS+S   ++   D    SD   S       D     
Sbjct: 613 SSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSS 672

Query: 340 DFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLDDLTQDLTVSQLSDVAD 393
           D + +S  S+ S  S   +   D S   +  ++SD  D  + D + S  S+ +D
Sbjct: 673 DSSDSSSSSDSSNSSDSSD-SSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSD 725



 Score = 34.3 bits (77), Expect = 0.20
 Identities = 47/215 (21%), Positives = 78/215 (36%), Gaps = 21/215 (9%)

Query: 179 GQGKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGK 238
           G+GK  +S     D  ++D +N SD+S S     S S+    S  +   S  S+ + D  
Sbjct: 543 GKGKSDSS-----DSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDS-DSS 596

Query: 239 DKAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAG 298
           D +      D  +     D       K+   + E    + S  S S +    S  S  + 
Sbjct: 597 DSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSE----SDSSDSDSKSDSSDSNSSDSSD 652

Query: 299 APSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEE 358
                DS +   ++   D    SD   S       D     D +++S  S+ S+ S    
Sbjct: 653 NSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSS---- 708

Query: 359 IEEDLSVEIDDINTSDKLDDLTQDLTVSQLSDVAD 393
                  + D  ++SD  +  + D   S  SD +D
Sbjct: 709 -------DSDSSDSSDSSNSNSSDSDSSNSSDSSD 736



 Score = 32.7 bits (73), Expect = 0.59
 Identities = 51/252 (20%), Positives = 88/252 (34%), Gaps = 17/252 (6%)

Query: 150 DLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLS 209
           D SD  +   S +   S+ ++ S             S   +    +ND +N SD+S S +
Sbjct: 745 DSSDSSNSSDSSDSSDSSNSSDSS-----DSSDSSDSSDSSNSSDSNDSSNSSDSSDSSN 799

Query: 210 EPKSKSSLHLLSHETKIGSFLSN-----RTLDGKDKAGLCPDEDDME-GDSFFDDPIPKP 263
              S +S           S  SN      + D  D +      D  +  D    D   + 
Sbjct: 800 SSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRS 859

Query: 264 EKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTV-LKDLKLISD 322
           + +          + + +  SD+       +S   + S   S+S   ++    D    S+
Sbjct: 860 DSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSN 919

Query: 323 KIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLDDLTQD 382
              S       D+    D +++S  S+ S+ S       D S   D  N+SD  D  + D
Sbjct: 920 SSDSSESSNSSDNSNSSDSSNSSDSSDSSDSS----NSSDSSNSSDSSNSSDSSDSNSSD 975

Query: 383 LT-VSQLSDVAD 393
            +  S  SD +D
Sbjct: 976 SSDSSNSSDSSD 987


>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
          Length = 1012

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 15/100 (15%)

Query: 4  TAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLK 63
          T A V++++  ELR  L QT ++ G+L+ +K +LR  +   L          P+++  L+
Sbjct: 9  TVADVLSQD--ELRKKLYQTFKDRGILDTLKTQLRNQLIHELMH--------PVLSGELQ 58

Query: 64 KFLNTKDGRLVA-----SLVAEFLQFFNLDFTLAVFQPET 98
              + +G  +      SLVA+ LQ    +++L+VF PE+
Sbjct: 59 PRSISVEGSSLLIGASNSLVADHLQRCGYEYSLSVFFPES 98


>gi|157738619 smoothelin-like 1 [Homo sapiens]
          Length = 512

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 18/157 (11%)

Query: 133 RRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGD 192
           ++ ++KE  P +G+ A    D +   K PE K + +   +K    +  G++K    +  +
Sbjct: 155 QKAEEKEAKPESGQKA----DANDRDK-PEPKATVEEEDAKTASQEETGQRKECSTEPKE 209

Query: 193 KKANDEAN-QSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDME 251
           K  ++EA  +S  +V   E K++        E K G   +    D K++A    D ++ E
Sbjct: 210 KATDEEAKAESQKAVVEDEAKAEPKEPDGKEEAKHG---AKEEADAKEEA---EDAEEAE 263

Query: 252 GDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPP 288
             S      P  E+   + KEP   AG + S  +  P
Sbjct: 264 PGS------PSEEQEQDVEKEPEGGAGVIPSSPEEWP 294


>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 1 [Homo sapiens]
          Length = 559

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 60/256 (23%), Positives = 93/256 (36%), Gaps = 23/256 (8%)

Query: 138 KEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKAND 197
           KE   T+    +       P K  E K+S++    ++ R + +  K TS +K G+ +   
Sbjct: 186 KESSKTSKPHKVTKEHRERPRKDSESKSSSK----ELEREQAKSSKDTS-RKLGEGRLPK 240

Query: 198 EANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFD 257
           E        +  EPK      +   ETK+ S        G       P     +  +  D
Sbjct: 241 EEKAPPPKAAFKEPK------MALKETKLES---TSPKGGPPPPPPPPPRASSKRPATAD 291

Query: 258 DPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDL 317
            P P  +K    +K   K + S    S   P  S  SS +     KD  S RG  V  + 
Sbjct: 292 SPKPSAKKQ---KKSSSKGSRSAPGTS---PRTSSSSSFSDKKPAKDKSSTRGEKVKAES 345

Query: 318 KLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLD 377
           +    K  +L +     +D    F S S +S  S  S   +   D   E    ++   L 
Sbjct: 346 EPREAK-KALEVEESNSEDEA-SFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPLR 403

Query: 378 DLTQDLTVSQLSDVAD 393
            + +DL  S+ SD  D
Sbjct: 404 SMVEDLQ-SEESDEDD 418


>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
           sapiens]
          Length = 724

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 297 AGAPSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIG 356
           A A  +K SESK      KDLK++  +I  L    G  D  + D  +     EK E  + 
Sbjct: 64  ASARKVKSSESKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLET---ELEKMEARLN 120

Query: 357 EEIEEDLSVEIDDINTSDKLDDLTQ--DLTVSQLSD 390
             + E  S+  ++     +L +LT+  +L  S+ S+
Sbjct: 121 AALREKTSLSANNATLEKQLIELTRTNELLKSKFSE 156


>gi|5032055 reticulon 2 isoform A [Homo sapiens]
          Length = 545

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 13/119 (10%)

Query: 256 FDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSES--KRGNT- 312
           FD  +    +     + PR Q  S++   D  P  S   SL   PSL  S    +RG+  
Sbjct: 69  FDGVVGSGGRRDSTARRPRPQGRSVSEPRDQHPQPSLGDSLESIPSLSQSPEPGRRGDPD 128

Query: 313 -------VLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSE---ISIGEEIEE 361
                   L+DL+L  D +G +  GTG  +D     ++     E  E   +  GE  EE
Sbjct: 129 TAPPSERPLEDLRLRLDHLGWVARGTGSGEDSSTSSSTPLEDEEPQEPNRLETGEAGEE 187


>gi|46255005 reticulon 2 isoform B [Homo sapiens]
          Length = 472

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 13/119 (10%)

Query: 256 FDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSES--KRGNT- 312
           FD  +    +     + PR Q  S++   D  P  S   SL   PSL  S    +RG+  
Sbjct: 69  FDGVVGSGGRRDSTARRPRPQGRSVSEPRDQHPQPSLGDSLESIPSLSQSPEPGRRGDPD 128

Query: 313 -------VLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSE---ISIGEEIEE 361
                   L+DL+L  D +G +  GTG  +D     ++     E  E   +  GE  EE
Sbjct: 129 TAPPSERPLEDLRLRLDHLGWVARGTGSGEDSSTSSSTPLEDEEPQEPNRLETGEAGEE 187


>gi|150456424 RW1 protein [Homo sapiens]
          Length = 1883

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 17/163 (10%)

Query: 160  SPEGKTSAQTTPSKIPRYKGQGK------KKTSGQKAGDKKANDEANQSDTSVSLSEPKS 213
            SP  +   +  PS +P+ KG+GK      K    Q+  +KK   +  + +   SL++  S
Sbjct: 1363 SPALEVFTEQPPSPLPKSKGKGKPLQRKVKPPKKQEEKEKKGKGKPQEDELKDSLADDDS 1422

Query: 214  KSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKE- 272
             S+    S+       L   T   K K  + P++ + E          K +K   ++KE 
Sbjct: 1423 SSTTTETSN-PDTEPLLKEDTEKQKGKQAM-PEKHESE----MSQVKQKSKKLLNIKKEI 1476

Query: 273  PRKQAGSLASLSDAPPLKS----GLSSLAGAPSLKDSESKRGN 311
            P     S   L   PPL+S     L S    P+   S SK  N
Sbjct: 1477 PTDVKPSSLELPYTPPLESKQRRNLPSKIPLPTAMTSGSKSRN 1519


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 95   QPETSTLQGLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDV 154
            QPE+  ++  E  E    +L  +EA    G     E     +  E     GE   +L  V
Sbjct: 2158 QPESEGIEAQEAEEEAQPELEGVEAPEAEG-----EAQPESEGIEAPEAEGEAQPELEGV 2212

Query: 155  HSPPKS------PEGKTSAQTTPSKIPRYKG--QGKKKTSGQKAGDKKANDEANQSDTSV 206
             +P         PEG  + +      P  +G  QG+KK S Q +     ++EA++S + V
Sbjct: 2213 EAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEASESSSPV 2272

Query: 207  SLSEP 211
                P
Sbjct: 2273 PEDRP 2277


>gi|109637769 calpastatin isoform k [Homo sapiens]
          Length = 673

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 151 LSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSE 210
           LS VH   KS EGK    T P  +P+        T    A +KKA   + +   S   +E
Sbjct: 22  LSVVHEK-KSQEGKPKEHTEPKSLPKQASD----TGSNDAHNKKAVSRSAEQQPSEKSTE 76

Query: 211 PKSK 214
           PK+K
Sbjct: 77  PKTK 80


>gi|109637765 calpastatin isoform i [Homo sapiens]
          Length = 708

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 151 LSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSE 210
           LS VH   KS EGK    T P  +P+        T    A +KKA   + +   S   +E
Sbjct: 44  LSVVHEK-KSQEGKPKEHTEPKSLPKQASD----TGSNDAHNKKAVSRSAEQQPSEKSTE 98

Query: 211 PKSK 214
           PK+K
Sbjct: 99  PKTK 102


>gi|109637763 calpastatin isoform h [Homo sapiens]
          Length = 769

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 151 LSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSE 210
           LS VH   KS EGK    T P  +P+        T    A +KKA   + +   S   +E
Sbjct: 105 LSVVHEK-KSQEGKPKEHTEPKSLPKQASD----TGSNDAHNKKAVSRSAEQQPSEKSTE 159

Query: 211 PKSK 214
           PK+K
Sbjct: 160 PKTK 163


>gi|109637757 calpastatin isoform e [Homo sapiens]
          Length = 756

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 151 LSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSE 210
           LS VH   KS EGK    T P  +P+        T    A +KKA   + +   S   +E
Sbjct: 105 LSVVHEK-KSQEGKPKEHTEPKSLPKQASD----TGSNDAHNKKAVSRSAEQQPSEKSTE 159

Query: 211 PKSK 214
           PK+K
Sbjct: 160 PKTK 163


>gi|27765085 calpastatin isoform b [Homo sapiens]
          Length = 686

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 151 LSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSE 210
           LS VH   KS EGK    T P  +P+        T    A +KKA   + +   S   +E
Sbjct: 22  LSVVHEK-KSQEGKPKEHTEPKSLPKQASD----TGSNDAHNKKAVSRSAEQQPSEKSTE 76

Query: 211 PKSK 214
           PK+K
Sbjct: 77  PKTK 80


>gi|109637753 calpastatin isoform a [Homo sapiens]
          Length = 791

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 151 LSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSE 210
           LS VH   KS EGK    T P  +P+        T    A +KKA   + +   S   +E
Sbjct: 127 LSVVHEK-KSQEGKPKEHTEPKSLPKQASD----TGSNDAHNKKAVSRSAEQQPSEKSTE 181

Query: 211 PKSK 214
           PK+K
Sbjct: 182 PKTK 185


>gi|148233596 LPS-responsive vesicle trafficking, beach and anchor
            containing [Homo sapiens]
          Length = 2863

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 29/223 (13%)

Query: 143  TTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQS 202
            TTG+ ++ +S+V +   SP     ++   S++P +                K+  E  + 
Sbjct: 1067 TTGKDSMTVSEVTASISSP-----SEEDASEMPEFLD--------------KSIVEEEED 1107

Query: 203  DTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPIPK 262
            D  V L    S +    L  E +  S LS    +  +K  +  ++D +     F +  P 
Sbjct: 1108 DDYVELKVEGSPTEEANLPTELQDNS-LSPAASEAGEKLDMFGNDDKL----IFQEGKPV 1162

Query: 263  PEKTYGLRKEPRKQAG---SLASLSDAPPLKSGLSSLAGAPSLKD--SESKRGNTVLKDL 317
             EK      +  K +G     AS S A   ++ +S +A    L     E K+   + ++ 
Sbjct: 1163 TEKQTDTETQDSKDSGIQTMTASGSSAMSPETTVSQIAVESDLGQMLEEGKKATNLTRET 1222

Query: 318  KLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE 360
            KLI+D  GS+   + E      D ++ +  +E+ E+     +E
Sbjct: 1223 KLINDCHGSVSEASSEQKIAKLDVSNVATDTERLELKASPNVE 1265


>gi|47933392 cytohesin 1 interacting protein [Homo sapiens]
          Length = 359

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 11/109 (10%)

Query: 220 LSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEG----DSFFDDP--IPKPEKTYGLRKEP 273
           LS E+   S+LS+ T+D +D    C  ED   G     +  DD   IPK    +  R   
Sbjct: 240 LSSESSCKSWLSSMTMDSEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSS 299

Query: 274 R--KQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLI 320
           R  +   + +S S +P  +  LSS+ G    K   S++G+   + LK I
Sbjct: 300 RRNRSISNTSSGSMSPLWEGNLSSMFGTLPRK---SRKGSVRKQLLKFI 345


>gi|168229156 NFKB activating protein [Homo sapiens]
          Length = 415

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 17/191 (8%)

Query: 152 SDVHSPPKSPEGK-------TSAQTTPSKIPRYKGQGKK---KTSGQKAGDKKANDEANQ 201
           SD H+P +  E K       TS +    K  R K + KK   K S ++   K + D  + 
Sbjct: 157 SDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSD 216

Query: 202 SDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPIP 261
           SD+    S+  +K        + K     S +    + K       D    +S  ++ + 
Sbjct: 217 SDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKES-QEEFLE 275

Query: 262 KPEKTYGLRKEPRKQAGSLA----SLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLK-- 315
            P K     +EP    G  A    +  D  PL  G + L G  +      K G  + +  
Sbjct: 276 NPWKDRTKAEEPSDLIGPEAPKTLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRG 335

Query: 316 DLKLISDKIGS 326
           ++ L S++I S
Sbjct: 336 EIGLTSEEIAS 346


>gi|21493045 A-kinase anchor protein 6 [Homo sapiens]
          Length = 2319

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 142  PTTGEGALDLSDVHSPPKSPEG-KTSAQTTPSKIPRYK-GQGKKKTSGQKAGDKKANDEA 199
            P++ E A    +V+  P++  G   + + TPSK+   K   GK   SG       A+ ++
Sbjct: 2216 PSSQERAEVGKEVNGLPQTSSGCAENLEFTPSKLDSEKESSGKPGESGMPEEHNAASAKS 2275

Query: 200  NQSDTSVSLSEPKSKSSLH 218
               D S+  ++P  K++LH
Sbjct: 2276 KVQDLSLKANQPTDKAALH 2294


>gi|94400925 synaptonemal complex protein 2-like [Homo sapiens]
          Length = 812

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/150 (28%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 157 PPKSPEGKTSAQT---TPSK--IPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSEP 211
           PP S  G    Q    +PS+  IP        KTS QK  D  A   A  S     L +P
Sbjct: 550 PPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDSAQKTELQDP 609

Query: 212 KSKSSLHLLSHETK------IGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPIPKPEK 265
            S S L  L H         +       +   K K     D+D  EG SF         K
Sbjct: 610 HSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEG-SF--------AK 660

Query: 266 TYGLRKEPRKQAGSLASLSDAPPLKSGLSS 295
           +   R E    +GS  S+++   L  G+S+
Sbjct: 661 SQQSRLEEEVASGSPFSITEERELPEGIST 690


>gi|18093112 ABT1-associated protein [Homo sapiens]
          Length = 851

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 56/253 (22%), Positives = 99/253 (39%), Gaps = 22/253 (8%)

Query: 150 DLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQ-----KAGDKKANDEANQS-- 202
           DLSD  S     + K  +Q    KI + K Q KK+   +     K   KKAN + +++  
Sbjct: 73  DLSDSDSNLSGEDSKALSQ---KKIKKKKTQTKKEIDSKNLVEKKKETKKANHKGSENKT 129

Query: 203 --DTSVSLSEPKSKSSLHL---LSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFD 257
             D S+ + + K+     +   +S +     F      + K+      D    E     D
Sbjct: 130 DLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKKNIVQHTTDSSLEEKQRTLD 189

Query: 258 DPIPKPEKTYGLR-KEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTV--L 314
               +  K+  +   + R++  S+  L          +S  G    KD+  +   +V  +
Sbjct: 190 SGTSEIVKSPRIECSKTRREMQSVVQLIMTRDSDGYENSTDGEMCDKDALEEDSESVSEI 249

Query: 315 KDLKLISDKIGSLGLGTGEDD----DYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDI 370
              +   ++I S+G  +G+DD    D  +D +      E SE     +   DL+    +I
Sbjct: 250 GSDEESENEITSVGRASGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSDSGPDLARGKGNI 309

Query: 371 NTSDKLDDLTQDL 383
            TS + +D T DL
Sbjct: 310 ETSSEDEDDTADL 322


>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
            sapiens]
          Length = 2564

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 16/146 (10%)

Query: 104  LEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTTGEG-ALDLSDVHSPPKSPE 162
            LE +E+  +++ I   +   G   L +++ + Q+KE GP    G +L       P + P 
Sbjct: 2300 LERQESSEQEMPI-RGDLVKGKATLADIVEQLQEKEAGPGLPAGPSLPQPRELPPGRLPN 2358

Query: 163  GKTSAQTTP-------SKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKS 215
            G    + TP          P+ + + + +  G+  G +++     Q  ++ +   P +  
Sbjct: 2359 GLELPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPAQGGSAPAPPPPPT-- 2416

Query: 216  SLHLLSHETKIGSFLSNRTLDGKDKA 241
              H + HE   G  L  R LD   K+
Sbjct: 2417 --HTVQHE---GFLLRKRELDANRKS 2437


>gi|19923592 oxysterol binding protein-like 11 [Homo sapiens]
          Length = 747

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 287 PPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSH 346
           PPLKS   SLA + +   S+ +     +    +   K+ SL   T    D++ +      
Sbjct: 166 PPLKSRSFSLASSSNSPISQRRPSQNAISFFNVGHSKLQSLSKRTNLPPDHLVEV----- 220

Query: 347 RSEKSEISIGEEIEEDLSVEIDDINTSDKLDDLTQDLTVSQLSDVA 392
              +  +S  E  + DL   I+ + TS  L  L QDL + + + +A
Sbjct: 221 ---REMMSHAEGQQRDLIRRIECLPTSGHLSSLDQDLLMLKATSMA 263


>gi|117190342 PHD finger protein 2 [Homo sapiens]
          Length = 1096

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 16/172 (9%)

Query: 130 EVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGK------- 182
           EV    ++KE+ P+  E     S +    K    KT     PSKIP+     K       
Sbjct: 461 EVCDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPPKPPKPPRPPKT 520

Query: 183 -KKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKA 241
            K   G K   KK+ + A+ +  ++ L E  +K +L  +    K  +  S  ++  KD  
Sbjct: 521 LKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLSVPNKDVV 580

Query: 242 GLCPDEDDME--------GDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSD 285
            +  D + +E         ++ +     KP+    + +E + +   LA   D
Sbjct: 581 HMQNDVERLEIREQTKSKSEAKWKYKNSKPDSLLKMEEEQKLEKSPLAGNKD 632


>gi|59814411 hypothetical protein LOC253725 [Homo sapiens]
          Length = 1318

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 3/141 (2%)

Query: 237 GKDKAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSL 296
           G    GL  D+D  + D FF  P  KP KT  ++            L     + S  +++
Sbjct: 444 GPPPTGLFDDDDGDDDDDFFSAPHSKPSKTRKVQSTADIFGDEEGDLFKEKAVASPEATV 503

Query: 297 AGAPSLK-DSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISI 355
           +     K  +E K   +  K+LK  S+     GL + E+D   D F+S S  + K    +
Sbjct: 504 SQTDENKARAEKKVTLSYSKNLKPSSETKTQKGLFSDEEDS-EDLFSSQSASNLKGASLL 562

Query: 356 GEEIEEDLSVEIDDINTSDKL 376
             ++   +S+  DD +  D L
Sbjct: 563 PGKLPTSVSL-FDDEDEEDNL 582


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.307    0.128    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,005,935
Number of Sequences: 37866
Number of extensions: 752523
Number of successful extensions: 2953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 2874
Number of HSP's gapped (non-prelim): 180
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.