FGFR1OP 26542

Name: FGFR1OP	Sequence: fasta or formatted (379aa)		NCBI GI: 36287110
Description: FGFR1 oncogene partner isoform b		Referenced in: Centrosome
Other entries for this name: alt prot [399aa] FGFR1 oncogene partner isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 27 3 C cysteine 0.5 2 1 D aspartate 9.5 36 3 E glutamate 9.8 37 2 F phenylalanine 2.9 11 2 G glycine 6.9 26 2 H histidine 1.1 4 1 I isoleucine 3.4 13 2 K lysine 7.7 29 2 L leucine 13.2 50 3 M methionine 0.5 2 1 N asparagine 3.4 13 1 P proline 4.5 17 2 Q glutamine 3.2 12 2 R arginine 3.4 13 2 S serine 10.6 40 2 T threonine 6.3 24 2 V valine 5.3 20 2 W tryptophan 0.0 0 0 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 FGFR1 oncogene partner isoform b FGFR1OP 0.983 FGFR1 oncogene partner isoform a C16orf63 0.030 hypothetical protein LOC123811 DSPP 0.023 dentin sialophosphoprotein preproprotein LRBA 0.017 LPS-responsive vesicle trafficking, beach and ancho... TGOLN2 0.016 trans-golgi network protein 2 OFD1 0.014 oral-facial-digital syndrome 1 TNRC18 0.014 trinucleotide repeat containing 18 MLLT1 0.013 myeloid/lymphoid or mixed-lineage leukemia (trithora... HMMR 0.013 hyaluronan-mediated motility receptor isoform b [Ho... RTN2 0.013 reticulon 2 isoform A RTN2 0.013 reticulon 2 isoform B CYTIP 0.011 cytohesin 1 interacting protein SRRM1 0.011 serine/arginine repetitive matrix 1 SMTNL1 0.011 smoothelin-like 1 CAMSAP1L1 0.011 calmodulin regulated spectrin-associated protein 1-l... NOLC1 0.010 nucleolar and coiled-body phosphoprotein 1 RAP1GAP 0.010 RAP1 GTPase activating protein isoform c RAP1GAP 0.010 RAP1 GTPase activating protein isoform a RLIM 0.010 ring finger protein, LIM domain interacting RLIM 0.010 ring finger protein, LIM domain interacting OSBPL11 0.010 oxysterol binding protein-like 11 FAM21C 0.010 hypothetical protein LOC253725 ANKS6 0.008 ankyrin repeat and sterile alpha motif domain contai... FAM21B 0.008 hypothetical protein LOC55747 MYH9 0.008 myosin, heavy polypeptide 9, non-muscle CHGA 0.008 chromogranin A precursor ZFHX2 0.008 PREDICTED: zinc finger homeobox 2 ZFHX2 0.008 PREDICTED: zinc finger homeobox 2 ZFHX2 0.008 PREDICTED: zinc finger homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.