FGFR1OP 33716

Name: FGFR1OP	Sequence: fasta or formatted (399aa)		NCBI GI: 5901954
Description: FGFR1 oncogene partner isoform a		Referenced in: Centrosome
Other entries for this name: alt prot [379aa] FGFR1 oncogene partner isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 28 3 C cysteine 0.5 2 1 D aspartate 9.3 37 3 E glutamate 9.3 37 2 F phenylalanine 2.8 11 2 G glycine 7.5 30 2 H histidine 1.0 4 1 I isoleucine 3.5 14 2 K lysine 8.8 35 3 L leucine 12.5 50 3 M methionine 0.5 2 1 N asparagine 3.3 13 1 P proline 4.5 18 2 Q glutamine 3.5 14 2 R arginine 3.5 14 2 S serine 10.3 41 2 T threonine 6.3 25 2 V valine 5.0 20 2 W tryptophan 0.0 0 0 Y tyrosine 1.0 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 FGFR1 oncogene partner isoform a FGFR1OP 0.930 FGFR1 oncogene partner isoform b C16orf63 0.028 hypothetical protein LOC123811 XPC 0.021 xeroderma pigmentosum, complementation group C isof... XPC 0.021 xeroderma pigmentosum, complementation group C isof... DSPP 0.015 dentin sialophosphoprotein preproprotein OFD1 0.013 oral-facial-digital syndrome 1 SMTNL1 0.013 smoothelin-like 1 MLLT1 0.013 myeloid/lymphoid or mixed-lineage leukemia (trithora... HMMR 0.012 hyaluronan-mediated motility receptor isoform b [Ho... RTN2 0.012 reticulon 2 isoform A RTN2 0.012 reticulon 2 isoform B TMEM131 0.011 RW1 protein RP1L1 0.011 retinitis pigmentosa 1-like 1 CAST 0.011 calpastatin isoform k CAST 0.011 calpastatin isoform i CAST 0.011 calpastatin isoform h CAST 0.011 calpastatin isoform e CAST 0.011 calpastatin isoform b CAST 0.011 calpastatin isoform a LRBA 0.011 LPS-responsive vesicle trafficking, beach and ancho... CYTIP 0.011 cytohesin 1 interacting protein NKAP 0.009 NFKB activating protein AKAP6 0.009 A-kinase anchor protein 6 SYCP2L 0.009 synaptonemal complex protein 2-like ESF1 0.009 ABT1-associated protein SPTBN4 0.009 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... OSBPL11 0.009 oxysterol binding protein-like 11 PHF2 0.009 PHD finger protein 2 FAM21C 0.009 hypothetical protein LOC253725 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.