Guide to the Human Genome
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Name: PHF19 Sequence: fasta or formatted (207aa) NCBI GI: 58331163
Description:

PHD finger protein 19 isoform b

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt prot [580aa] PHD finger protein 19 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         15           1
 C cysteine            4.3          9           1
 D aspartate           4.8         10           1
 E glutamate           3.4          7           2
 F phenylalanine       1.9          4           1
 G glycine             8.2         17           1
 H histidine           2.4          5           1
 I isoleucine          3.9          8           1
 K lysine              7.2         15           1
 L leucine            11.1         23           2
 M methionine          1.0          2           1
 N asparagine          3.4          7           2
 P proline             6.3         13           1
 Q glutamine           4.8         10           2
 R arginine            3.9          8           2
 S serine             11.1         23           3
 T threonine           4.8         10           1
 V valine              4.8         10           1
 W tryptophan          2.4          5           1
 Y tyrosine            2.9          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PHD finger protein 19 isoform b 
PHF19                 0.757   PHD finger protein 19 isoform a 
PHF1                  0.265   PHD finger protein 1 isoform a 
PHF1                  0.265   PHD finger protein 1 isoform b 
MTF2                  0.252   metal response element binding transcription factor 2...
PHF14                 0.047   PHD finger protein 14 isoform 2 
PHF14                 0.047   PHD finger protein 14 isoform 1 
DPF2                  0.034   D4, zinc and double PHD fingers family 2 
MLL3                  0.034   myeloid/lymphoid or mixed-lineage leukemia 3 
BRPF1                 0.029   bromodomain and PHD finger-containing protein 1 isof...
BRD1                  0.029   bromodomain containing protein 1 
BRPF1                 0.029   bromodomain and PHD finger-containing protein 1 isof...
PHRF1                 0.029   PHD and ring finger domains 1 
SP110                 0.027   SP110 nuclear body protein isoform a 
SP110                 0.027   SP110 nuclear body protein isoform c 
PHF16                 0.027   PHD finger protein 16 
PHF16                 0.027   PHD finger protein 16 
MLL2                  0.027   myeloid/lymphoid or mixed-lineage leukemia 2 
BRPF3                 0.027   bromodomain and PHD finger containing, 3 
INTS12                0.027   integrator complex subunit 12 
INTS12                0.027   integrator complex subunit 12 
PRKD2                 0.025   protein kinase D2 isoform A 
PRKD2                 0.025   protein kinase D2 isoform A 
PRKD2                 0.025   protein kinase D2 isoform A 
PHF17                 0.025   PHD finger protein 17 short isoform 
PHF17                 0.025   PHD finger protein 17 long isoform 
PHF15                 0.025   PHD finger protein 15 
MLL                   0.022   myeloid/lymphoid or mixed-lineage leukemia protein [...
PRKD2                 0.020   protein kinase D2 isoform B 
LOC100287514          0.020   PREDICTED: hypothetical protein XP_002343754 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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