PHF1 3404

Name: PHF1	Sequence: fasta or formatted (567aa)		NCBI GI: 13435397
Description: PHD finger protein 1 isoform b		Referenced in: PHD Finger Proteins
Other entries for this name: alt prot [457aa] PHD finger protein 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 34 2 C cysteine 4.1 23 2 D aspartate 4.2 24 2 E glutamate 5.1 29 2 F phenylalanine 3.0 17 1 G glycine 10.1 57 4 H histidine 2.3 13 1 I isoleucine 1.8 10 1 K lysine 4.4 25 3 L leucine 10.1 57 3 M methionine 1.2 7 1 N asparagine 1.4 8 1 P proline 10.2 58 3 Q glutamine 3.9 22 2 R arginine 8.8 50 3 S serine 10.6 60 4 T threonine 3.0 17 1 V valine 5.5 31 2 W tryptophan 1.9 11 1 Y tyrosine 2.5 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PHD finger protein 1 isoform b PHF1 0.624 PHD finger protein 1 isoform a MTF2 0.326 metal response element binding transcription factor 2... PHF19 0.322 PHD finger protein 19 isoform a PHF19 0.092 PHD finger protein 19 isoform b PHF16 0.025 PHD finger protein 16 PHF16 0.025 PHD finger protein 16 PHF15 0.023 PHD finger protein 15 INTS12 0.023 integrator complex subunit 12 INTS12 0.023 integrator complex subunit 12 BRPF1 0.022 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.022 bromodomain and PHD finger-containing protein 1 isof... MLL 0.021 myeloid/lymphoid or mixed-lineage leukemia protein [... SMARCA4 0.021 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.021 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.021 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.021 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.021 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.021 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.021 SWI/SNF-related matrix-associated actin-dependent re... PHF17 0.021 PHD finger protein 17 short isoform PHF17 0.021 PHD finger protein 17 long isoform MLL4 0.021 myeloid/lymphoid or mixed-lineage leukemia 4 CSRP2BP 0.020 CSRP2 binding protein isoform a RICH2 0.019 Rho GTPase-activating protein RICH2 FLJ22184 0.019 PREDICTED: hypothetical protein FLJ22184 BRD1 0.019 bromodomain containing protein 1 SFPQ 0.019 splicing factor proline/glutamine rich (polypyrimidin... FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 WIPF1 0.017 WAS/WASL interacting protein family, member 1 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.