Guide to the Human Genome
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Name: MTF2 Sequence: fasta or formatted (593aa) NCBI GI: 6678764
Description:

metal response element binding transcription factor 2

Referenced in:

PHD Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         33           2
 C cysteine            3.7         22           2
 D aspartate           5.2         31           2
 E glutamate           6.7         40           2
 F phenylalanine       2.9         17           1
 G glycine             6.9         41           2
 H histidine           2.9         17           1
 I isoleucine          4.7         28           2
 K lysine              9.4         56           4
 L leucine             8.6         51           2
 M methionine          1.7         10           1
 N asparagine          3.4         20           2
 P proline             4.7         28           2
 Q glutamine           4.2         25           2
 R arginine            5.7         34           4
 S serine              8.1         48           3
 T threonine           5.9         35           3
 V valine              4.4         26           1
 W tryptophan          1.9         11           1
 Y tyrosine            3.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metal response element binding transcription factor 2... 
PHF19                 0.384   PHD finger protein 19 isoform a 
PHF1                  0.315   PHD finger protein 1 isoform b 
PHF1                  0.302   PHD finger protein 1 isoform a 
PHF19                 0.085   PHD finger protein 19 isoform b 
CSRP2BP               0.028   CSRP2 binding protein isoform a 
MLL                   0.025   myeloid/lymphoid or mixed-lineage leukemia protein [...
PHF16                 0.022   PHD finger protein 16 
PHF16                 0.022   PHD finger protein 16 
PHF17                 0.021   PHD finger protein 17 short isoform 
PHF17                 0.021   PHD finger protein 17 long isoform 
PHF15                 0.021   PHD finger protein 15 
MLL4                  0.019   myeloid/lymphoid or mixed-lineage leukemia 4 
CRKRS                 0.017   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.017   Cdc2-related kinase, arginine/serine-rich isoform 1...
CHD4                  0.015   chromodomain helicase DNA binding protein 4 
BRPF1                 0.015   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.015   bromodomain and PHD finger-containing protein 1 isof...
INTS12                0.014   integrator complex subunit 12 
INTS12                0.014   integrator complex subunit 12 
BRD1                  0.014   bromodomain containing protein 1 
MLL3                  0.014   myeloid/lymphoid or mixed-lineage leukemia 3 
UHRF2                 0.013   ubiquitin-like with PHD and ring finger domains 2 [H...
PHF10                 0.012   PHD finger protein 10 isoform b 
PHF10                 0.012   PHD finger protein 10 isoform a 
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform...
PHF14                 0.012   PHD finger protein 14 isoform 2 
PHF14                 0.012   PHD finger protein 14 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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