Guide to the Human Genome
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Name: PHF19 Sequence: fasta or formatted (580aa) NCBI GI: 58331161
Description:

PHD finger protein 19 isoform a

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt prot [207aa] PHD finger protein 19 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         37           2
 C cysteine            3.8         22           1
 D aspartate           4.7         27           2
 E glutamate           5.7         33           2
 F phenylalanine       4.0         23           2
 G glycine             7.1         41           2
 H histidine           2.6         15           2
 I isoleucine          3.4         20           1
 K lysine              7.4         43           4
 L leucine            10.5         61           2
 M methionine          1.2          7           2
 N asparagine          3.3         19           2
 P proline             5.3         31           2
 Q glutamine           4.1         24           3
 R arginine            6.4         37           2
 S serine              9.1         53           3
 T threonine           4.5         26           2
 V valine              4.3         25           2
 W tryptophan          2.2         13           1
 Y tyrosine            4.0         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PHD finger protein 19 isoform a 
MTF2                  0.391   metal response element binding transcription factor 2...
PHF1                  0.318   PHD finger protein 1 isoform b 
PHF1                  0.299   PHD finger protein 1 isoform a 
PHF19                 0.261   PHD finger protein 19 isoform b 
CSRP2BP               0.030   CSRP2 binding protein isoform a 
PHF14                 0.019   PHD finger protein 14 isoform 2 
PHF14                 0.019   PHD finger protein 14 isoform 1 
BRPF1                 0.016   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.016   bromodomain and PHD finger-containing protein 1 isof...
MLL3                  0.014   myeloid/lymphoid or mixed-lineage leukemia 3 
BRD1                  0.014   bromodomain containing protein 1 
PHF16                 0.014   PHD finger protein 16 
PHF16                 0.014   PHD finger protein 16 
MLL2                  0.013   myeloid/lymphoid or mixed-lineage leukemia 2 
MLLT6                 0.013   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLL                   0.013   myeloid/lymphoid or mixed-lineage leukemia protein [...
BRPF3                 0.013   bromodomain and PHD finger containing, 3 
RTF1                  0.013   Paf1/RNA polymerase II complex component 
PHF17                 0.013   PHD finger protein 17 short isoform 
PHF17                 0.013   PHD finger protein 17 long isoform 
AASDH                 0.013   aminoadipate-semialdehyde dehydrogenase 
PHF15                 0.013   PHD finger protein 15 
SP110                 0.010   SP110 nuclear body protein isoform a 
SP110                 0.010   SP110 nuclear body protein isoform c 
MLLT10                0.010   myeloid/lymphoid or mixed-lineage leukemia transloca...
MLLT10                0.010   myeloid/lymphoid or mixed-lineage leukemia translocat...
DPF2                  0.010   D4, zinc and double PHD fingers family 2 
INTS12                0.009   integrator complex subunit 12 
INTS12                0.009   integrator complex subunit 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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