Guide to the Human Genome
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Name: INTS12 Sequence: fasta or formatted (462aa) NCBI GI: 215599585
Description:

integrator complex subunit 12

Referenced in:

PHD Finger Proteins
Polyadenylation

Other entries for this name:
alt mRNA [462aa] integrator complex subunit 12
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         34           2
 C cysteine            1.7          8           1
 D aspartate           3.7         17           2
 E glutamate           4.8         22           2
 F phenylalanine       1.5          7           1
 G glycine             6.1         28           2
 H histidine           0.9          4           1
 I isoleucine          2.6         12           1
 K lysine             11.5         53           3
 L leucine             7.8         36           2
 M methionine          2.4         11           2
 N asparagine          3.9         18           3
 P proline             7.8         36           4
 Q glutamine           4.3         20           1
 R arginine            2.8         13           1
 S serine             15.4         71           4
 T threonine           8.4         39           2
 V valine              6.1         28           2
 W tryptophan          0.4          2           1
 Y tyrosine            0.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 12 
INTS12                1.000   integrator complex subunit 12 
SRRM2                 0.034   splicing coactivator subunit SRm300 
MUC5B                 0.034   mucin 5, subtype B, tracheobronchial 
MUC21                 0.031   mucin 21 
LOC100131251          0.031   PREDICTED: hypothetical protein 
LOC100131251          0.031   PREDICTED: hypothetical protein 
PHF1                  0.031   PHD finger protein 1 isoform a 
PHF1                  0.031   PHD finger protein 1 isoform b 
MUC5AC                0.030   mucin 5AC 
LOC100133756          0.030   PREDICTED: hypothetical protein, partial 
LOC100287737          0.028   PREDICTED: hypothetical protein XP_002343203 
LOC100132635          0.028   PREDICTED: similar to mucin 5, partial 
LOC100294249          0.028   PREDICTED: hypothetical protein XP_002344067 
LOC100293409          0.027   PREDICTED: similar to Mucin-19 
LOC100291118          0.027   PREDICTED: hypothetical protein XP_002347351 
PODXL                 0.027   podocalyxin-like isoform 2 precursor 
MUC17                 0.027   mucin 17 
LOC729792             0.027   PREDICTED: hypothetical protein 
LOC100294420          0.027   PREDICTED: similar to mucin 2 
LOC729792             0.027   PREDICTED: hypothetical protein 
LOC729792             0.027   PREDICTED: hypothetical protein 
LOC100294501          0.027   PREDICTED: hypothetical protein 
LOC100294238          0.027   PREDICTED: hypothetical protein 
LOC100294204          0.027   PREDICTED: hypothetical protein 
LOC100294136          0.027   PREDICTED: hypothetical protein 
LOC100294091          0.027   PREDICTED: hypothetical protein 
LOC730401             0.027   PREDICTED: hypothetical protein 
MUC2                  0.026   mucin 2 precursor 
MED1                  0.026   mediator complex subunit 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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