Guide to the Human Genome
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Name: TOMM70A Sequence: fasta or formatted (608aa) NCBI GI: 54607135
Description:

translocase of outer mitochondrial membrane 70 homolog A

Referenced in:

Mitochondria
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         75           3
 C cysteine            2.0         12           1
 D aspartate           5.8         35           2
 E glutamate           8.1         49           3
 F phenylalanine       2.8         17           1
 G glycine             6.7         41           4
 H histidine           1.3          8           2
 I isoleucine          4.1         25           2
 K lysine              9.5         58           2
 L leucine             9.5         58           3
 M methionine          2.8         17           1
 N asparagine          4.1         25           2
 P proline             3.9         24           2
 Q glutamine           6.2         38           4
 R arginine            4.1         25           3
 S serine              5.1         31           2
 T threonine           3.1         19           2
 V valine              3.8         23           2
 W tryptophan          0.7          4           1
 Y tyrosine            3.9         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of outer mitochondrial membrane 70 homol... 
RPAP3                 0.057   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.057   RNA polymerase II associated protein 3 isoform 1 [H...
SPAG1                 0.054   sperm associated antigen 1 
SPAG1                 0.054   sperm associated antigen 1 
STIP1                 0.053   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
TTC1                  0.048   tetratricopeptide repeat domain 1 
C14orf25              0.045   PREDICTED: chromosome 14 open reading frame 25 [Hom...
TTC6                  0.044   PREDICTED: tetratricopeptide repeat domain 6 
TTC6                  0.044   PREDICTED: tetratricopeptide repeat domain 6 
RPAP3                 0.042   RNA polymerase II associated protein 3 isoform 3 [H...
DNAJC7                0.040   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.040   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
TOMM34                0.040   translocase of outer mitochondrial membrane 34 [Homo...
PPP5C                 0.037   protein phosphatase 5, catalytic subunit 
UNC45B                0.035   cardiomyopathy associated 4 isoform 2 
UNC45B                0.035   cardiomyopathy associated 4 isoform 1 
STUB1                 0.033   STIP1 homology and U-box containing protein 1 
UNC45A                0.033   smooth muscle cell associated protein-1 isoform 2 [H...
SGTB                  0.032   small glutamine-rich tetratricopeptide repeat (TPR)-...
ST13                  0.031   heat shock 70kD protein binding protein 
PPID                  0.031   peptidylprolyl isomerase D 
TTC12                 0.031   tetratricopeptide repeat domain 12 
UNC45A                0.030   smooth muscle cell associated protein-1 isoform 3 [H...
OGT                   0.029   O-linked GlcNAc transferase isoform 2 
OGT                   0.029   O-linked GlcNAc transferase isoform 1 
WDTC1                 0.027   WD and tetratricopeptide repeats 1 
TMTC3                 0.027   transmembrane and tetratricopeptide repeat containi...
TTC28                 0.026   tetratricopeptide repeat domain 28 
TTC4                  0.026   tetratricopeptide repeat domain 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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