Guide to the Human Genome
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Name: TTC14 Sequence: fasta or formatted (770aa) NCBI GI: 33457330
Description:

tetratricopeptide repeat domain 14 isoform a

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [439aa] tetratricopeptide repeat domain 14 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         41           2
 C cysteine            1.2          9           1
 D aspartate           5.6         43           2
 E glutamate          10.0         77           4
 F phenylalanine       3.4         26           2
 G glycine             4.7         36           2
 H histidine           3.0         23           1
 I isoleucine          4.4         34           2
 K lysine              9.4         72           3
 L leucine             9.0         69           2
 M methionine          1.3         10           1
 N asparagine          4.5         35           1
 P proline             3.9         30           3
 Q glutamine           3.8         29           2
 R arginine            7.5         58           2
 S serine             13.2        102           9
 T threonine           2.2         17           1
 V valine              3.4         26           2
 W tryptophan          0.5          4           1
 Y tyrosine            3.8         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat domain 14 isoform a 
TTC14                 0.552   tetratricopeptide repeat domain 14 isoform b 
SFRS4                 0.025   splicing factor, arginine/serine-rich 4 
FAM133B               0.025   hypothetical protein LOC257415 isoform 2 
FAM133B               0.025   hypothetical protein LOC257415 isoform 1 
CROP                  0.024   cisplatin resistance-associated overexpressed protei...
CROP                  0.024   cisplatin resistance-associated overexpressed protei...
SFRS18                0.023   splicing factor, arginine/serine-rich 130 
SFRS18                0.023   splicing factor, arginine/serine-rich 130 
FAM133A               0.023   hypothetical protein LOC286499 
CIR1                  0.023   CBF1 interacting corepressor 
STIP1                 0.023   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
TCHH                  0.021   trichohyalin 
SFRS12                0.020   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.020   splicing factor, arginine/serine-rich 12 isoform b [...
LOC100294088          0.020   PREDICTED: hypothetical protein, partial 
SYCP1                 0.020   synaptonemal complex protein 1 
LOC100286959          0.020   PREDICTED: hypothetical protein XP_002343921 
BAT2D1                0.019   HBxAg transactivated protein 2 
PRPF38B               0.019   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
PNN                   0.019   pinin, desmosome associated protein 
PPIG                  0.019   peptidylprolyl isomerase G 
ANKRD11               0.019   ankyrin repeat domain 11 
GPATCH8               0.019   G patch domain containing 8 
ZCCHC10               0.019   zinc finger, CCHC domain containing 10 
CGNL1                 0.018   cingulin-like 1 
GOLGA4                0.018   golgi autoantigen, golgin subfamily a, 4 
ZC3H18                0.018   zinc finger CCCH-type containing 18 
ZC3H6                 0.018   zinc finger CCCH-type domain containing 6 
LOC100133599          0.017   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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