Guide to the Human Genome
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Name: DNAJC3 Sequence: fasta or formatted (504aa) NCBI GI: 5453980
Description:

DnaJ (Hsp40) homolog, subfamily C, member 3

Referenced in:

Heat-Shock Proteins and Chaperonins
Interferon
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         48           3
 C cysteine            1.6          8           1
 D aspartate           7.1         36           2
 E glutamate           9.9         50           3
 F phenylalanine       4.4         22           1
 G glycine             5.0         25           4
 H histidine           2.2         11           1
 I isoleucine          4.2         21           2
 K lysine             10.1         51           3
 L leucine             9.9         50           3
 M methionine          1.6          8           1
 N asparagine          3.8         19           1
 P proline             3.0         15           1
 Q glutamine           5.4         27           2
 R arginine            5.2         26           2
 S serine              6.0         30           2
 T threonine           2.4         12           1
 V valine              4.6         23           1
 W tryptophan          0.8          4           1
 Y tyrosine            3.6         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily C, member 3 
DNAJC7                0.158   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.152   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJB6                0.060   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.060   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB8                0.056   DnaJ homolog, subfamily B, member 8 
DNAJB7                0.051   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB11               0.051   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJB5                0.050   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.050   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.050   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB12               0.050   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.050   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB2                0.050   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.050   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB3                0.049   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB4                0.048   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJA4                0.048   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA1                0.048   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJB1                0.046   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJA4                0.046   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB9                0.045   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJA3                0.044   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.044   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
RPAP3                 0.043   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.043   RNA polymerase II associated protein 3 isoform 1 [H...
DNAJC21               0.042   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.042   DnaJ homology subfamily A member 5 isoform 2 
TTC13                 0.040   tetratricopeptide repeat domain 13 isoform a 
DNAJC10               0.039   DnaJ (Hsp40) homolog, subfamily C, member 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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