Guide to the Human Genome
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Name: UNC45A Sequence: fasta or formatted (944aa) NCBI GI: 29725607
Description:

smooth muscle cell associated protein-1 isoform 2

Referenced in:

Muscle
Tetratricopeptide Domains

Other entries for this name:
alt prot [929aa] smooth muscle cell associated protein-1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7        101           4
 C cysteine            2.3         22           1
 D aspartate           4.8         45           2
 E glutamate           8.5         80           3
 F phenylalanine       2.3         22           1
 G glycine             6.9         65           3
 H histidine           1.4         13           1
 I isoleucine          3.7         35           2
 K lysine              6.4         60           2
 L leucine            13.6        128           3
 M methionine          2.6         25           2
 N asparagine          2.9         27           2
 P proline             3.1         29           2
 Q glutamine           5.0         47           1
 R arginine            5.6         53           2
 S serine              6.6         62           2
 T threonine           4.2         40           2
 V valine              7.4         70           3
 W tryptophan          0.5          5           1
 Y tyrosine            1.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   smooth muscle cell associated protein-1 isoform 2 [H... 
UNC45A                0.980   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45B                0.561   cardiomyopathy associated 4 isoform 2 
UNC45B                0.558   cardiomyopathy associated 4 isoform 1 
FKBPL                 0.031   WAF-1/CIP1 stabilizing protein 39 
TTC1                  0.028   tetratricopeptide repeat domain 1 
TOMM34                0.027   translocase of outer mitochondrial membrane 34 [Homo...
RPAP3                 0.026   RNA polymerase II associated protein 3 isoform 3 [H...
RPAP3                 0.026   RNA polymerase II associated protein 3 isoform 1 [H...
SPAG1                 0.025   sperm associated antigen 1 
SPAG1                 0.025   sperm associated antigen 1 
ZC3H7B                0.024   zinc finger CCCH-type containing 7B 
RPAP3                 0.024   RNA polymerase II associated protein 3 isoform 2 [H...
STUB1                 0.024   STIP1 homology and U-box containing protein 1 
PPP5C                 0.023   protein phosphatase 5, catalytic subunit 
SGTB                  0.023   small glutamine-rich tetratricopeptide repeat (TPR)-...
LONRF3                0.023   LON peptidase N-terminal domain and ring finger 3 is...
TOMM70A               0.022   translocase of outer mitochondrial membrane 70 homol...
DYX1C1                0.021   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
ZC3H7A                0.021   zinc finger CCCH-type containing 7A 
STIP1                 0.020   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
DNAJC7                0.019   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.019   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
FKBP4                 0.018   FK506 binding protein 52 
PPID                  0.018   peptidylprolyl isomerase D 
TTC28                 0.018   tetratricopeptide repeat domain 28 
TANC1                 0.016   tetratricopeptide repeat, ankyrin repeat and coiled...
TTC12                 0.015   tetratricopeptide repeat domain 12 
TTC9C                 0.014   tetratricopeptide repeat domain 9C 
FKBP8                 0.014   FK506-binding protein 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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