Guide to the Human Genome
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Search of human proteins with 5803145

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5803145 ralA binding protein 1 [Homo sapiens]
         (655 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5803145 ralA binding protein 1 [Homo sapiens]                     1300   0.0  
gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]        107   3e-23
gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens]        107   3e-23
gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sap...   107   5e-23
gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sap...   107   5e-23
gi|71834863 Rho GTPase activating protein 5 isoform a [Homo sapi...   105   1e-22
gi|71834861 Rho GTPase activating protein 5 isoform b [Homo sapi...   105   2e-22
gi|229094128 active breakpoint cluster region-related  protein i...   102   9e-22
gi|38679957 active breakpoint cluster region-related  protein is...   102   9e-22
gi|38679954 active breakpoint cluster region-related  protein is...   102   9e-22
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ...    97   5e-20
gi|156119615 myosin IXA [Homo sapiens]                                 96   1e-19
gi|188497642 ARHGAP15 [Homo sapiens]                                   94   3e-19
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]            94   4e-19
gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sa...    92   2e-18
gi|26986534 Rho GTPase activating protein 12 [Homo sapiens]            91   3e-18
gi|56119110 family with sequence similarity 13, member A1 isofor...    91   3e-18
gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo sa...    91   4e-18
gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sa...    91   4e-18
gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]             90   7e-18
gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]           90   7e-18
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]    89   1e-17
gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]     89   1e-17
gi|4757980 beta chimerin isoform 2 [Homo sapiens]                      89   2e-17
gi|91106928 beta chimerin isoform 1 [Homo sapiens]                     89   2e-17
gi|23510413 sorting nexin 26 [Homo sapiens]                            88   3e-17
gi|54860079 nadrin isoform 1 [Homo sapiens]                            87   5e-17
gi|54860105 nadrin isoform 2 [Homo sapiens]                            87   5e-17
gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]            84   3e-16
gi|206597515 ArfGAP with RhoGAP domain, ankyrin repeat and PH do...    84   4e-16

>gi|5803145 ralA binding protein 1 [Homo sapiens]
          Length = 655

 Score = 1300 bits (3363), Expect = 0.0
 Identities = 655/655 (100%), Positives = 655/655 (100%)

Query: 1   MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDV 60
           MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDV
Sbjct: 1   MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDV 60

Query: 61  VSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKK 120
           VSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKK
Sbjct: 61  VSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKK 120

Query: 121 KEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQ 180
           KEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQ
Sbjct: 121 KEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQ 180

Query: 181 IDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKV 240
           IDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKV
Sbjct: 181 IDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKV 240

Query: 241 DELKAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKV 300
           DELKAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKV
Sbjct: 241 DELKAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKV 300

Query: 301 QEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVF 360
           QEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVF
Sbjct: 301 QEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVF 360

Query: 361 FTHVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGI 420
           FTHVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGI
Sbjct: 361 FTHVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGI 420

Query: 421 KDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVIN 480
           KDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVIN
Sbjct: 421 KDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVIN 480

Query: 481 ILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSS 540
           ILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSS
Sbjct: 481 ILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSS 540

Query: 541 ESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAK 600
           ESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAK
Sbjct: 541 ESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAK 600

Query: 601 AEQQAQEDEEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI 655
           AEQQAQEDEEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI
Sbjct: 601 AEQQAQEDEEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI 655


>gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]
          Length = 1227

 Score =  107 bits (267), Expect = 3e-23
 Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 7/165 (4%)

Query: 189  IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
            +FG+ +A   +R    +  ++P + R+C++ +E+ GM+  GIYRVSG+ + +  LKAA+D
Sbjct: 1007 VFGVKIAVVTKR----ERSKVPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFD 1062

Query: 249  ---REESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQR 305
               ++ S  + + + N +A  LK Y R+LPE L T E  P F E    +    K      
Sbjct: 1063 VNNKDVSVMMSEMDVNAIAGTLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLN 1122

Query: 306  LLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
            LL  LPE N L   +L+ H+  V  KE   KM++ N++ V  PT+
Sbjct: 1123 LLLSLPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTL 1167


>gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens]
          Length = 1271

 Score =  107 bits (267), Expect = 3e-23
 Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 7/165 (4%)

Query: 189  IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
            +FG+ +A   +R    +  ++P + R+C++ +E+ GM+  GIYRVSG+ + +  LKAA+D
Sbjct: 1051 VFGVKIAVVTKR----ERSKVPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFD 1106

Query: 249  ---REESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQR 305
               ++ S  + + + N +A  LK Y R+LPE L T E  P F E    +    K      
Sbjct: 1107 VNNKDVSVMMSEMDVNAIAGTLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLN 1166

Query: 306  LLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
            LL  LPE N L   +L+ H+  V  KE   KM++ N++ V  PT+
Sbjct: 1167 LLLSLPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTL 1211


>gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo
           sapiens]
          Length = 890

 Score =  107 bits (266), Expect = 5e-23
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG  L + ++    + G  +P V + C ++VE+YG+  +GIYR+SG+ S + +L+  ++
Sbjct: 17  VFGCDLQEHLQ----HSGQEVPQVLKSCAEFVEEYGV-VDGIYRLSGVSSNIQKLRQEFE 71

Query: 249 REESTNLED----YEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQ 304
            E   +L       + + V+SL K Y R+LP+ LLT  L  +F EA G   E E++ +  
Sbjct: 72  SERKPDLRRDVYLQDIHCVSSLCKAYFRELPDPLLTYRLYDKFAEAVGVQLEPERLVKIL 131

Query: 305 RLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPT--------------- 349
            +L+ELP  NY  + +L+ H+ H+ +   +T M+ +N++IV +P                
Sbjct: 132 EVLRELPVPNYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNLLRSKDIEASGFNGT 191

Query: 350 -----VQISNRVLYVFFTHVQELFGNVVL 373
                V++ + V+    THV +LFG   L
Sbjct: 192 AAFMEVRVQSIVVEFILTHVDQLFGGAAL 220


>gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo
           sapiens]
          Length = 1101

 Score =  107 bits (266), Expect = 5e-23
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG  L + ++    + G  +P V + C ++VE+YG+  +GIYR+SG+ S + +L+  ++
Sbjct: 17  VFGCDLQEHLQ----HSGQEVPQVLKSCAEFVEEYGV-VDGIYRLSGVSSNIQKLRQEFE 71

Query: 249 REESTNLED----YEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQ 304
            E   +L       + + V+SL K Y R+LP+ LLT  L  +F EA G   E E++ +  
Sbjct: 72  SERKPDLRRDVYLQDIHCVSSLCKAYFRELPDPLLTYRLYDKFAEAVGVQLEPERLVKIL 131

Query: 305 RLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPT--------------- 349
            +L+ELP  NY  + +L+ H+ H+ +   +T M+ +N++IV +P                
Sbjct: 132 EVLRELPVPNYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNLLRSKDIEASGFNGT 191

Query: 350 -----VQISNRVLYVFFTHVQELFGNVVL 373
                V++ + V+    THV +LFG   L
Sbjct: 192 AAFMEVRVQSIVVEFILTHVDQLFGGAAL 220


>gi|71834863 Rho GTPase activating protein 5 isoform a [Homo sapiens]
          Length = 1502

 Score =  105 bits (263), Expect = 1e-22
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 28/294 (9%)

Query: 66   KDHGKK---KGKFKKK---EKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSK 119
            K HG++   K K+K K    K    Y     D+S DEA + SK KR KG H   +     
Sbjct: 1143 KSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKR-KGRHRGSEEDPLL 1201

Query: 120  KKEKDFKIK-EKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEV 178
               + +K   + P     +E   K+ K K  K         VK+ K++KKK K    P  
Sbjct: 1202 SPVETWKGGIDNPAITSDQELDDKKMKKKTHK---------VKEDKKQKKKTKNFNPPTR 1252

Query: 179  PQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKS 238
               +       FG+PL D V          +P    +C++++E  G+  EG+YRVSG K+
Sbjct: 1253 RNWE----SNYFGMPLQDLVTAEKP-----IPLFVEKCVEFIEDTGLCTEGLYRVSGNKT 1303

Query: 239  KVDELKAAYDREESTNLEDYEP--NTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTE 296
              D ++  +D++ + NL   E   N VA  LK +  DLP+ L+   L P   EA     +
Sbjct: 1304 DQDNIQKQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDK 1363

Query: 297  TEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
            TE++   + ++K+    NY +  ++I H++ V  +     M   N+SI   PT+
Sbjct: 1364 TERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTL 1417


>gi|71834861 Rho GTPase activating protein 5 isoform b [Homo sapiens]
          Length = 1501

 Score =  105 bits (261), Expect = 2e-22
 Identities = 86/297 (28%), Positives = 136/297 (45%), Gaps = 35/297 (11%)

Query: 66   KDHGKK---KGKFKKK---EKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKK--PSF 117
            K HG++   K K+K K    K    Y     D+S DEA + SK KR KG H   +  P  
Sbjct: 1143 KSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKR-KGRHRGSEEDPLL 1201

Query: 118  SKKKEKDFKIKEKP--KEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQE 175
            S  +     I       +++  ++K K++ HK K+ K             KKKK K    
Sbjct: 1202 SPVETWKGGIDNPAITSDQELDDKKMKKKTHKVKEDK-------------KKKKTKNFNP 1248

Query: 176  PEVPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSG 235
            P     +       FG+PL D V          +P    +C++++E  G+  EG+YRVSG
Sbjct: 1249 PTRRNWE----SNYFGMPLQDLVTAEKP-----IPLFVEKCVEFIEDTGLCTEGLYRVSG 1299

Query: 236  IKSKVDELKAAYDREESTNLEDYEP--NTVASLLKQYLRDLPENLLTKELMPRFEEACGR 293
             K+  D ++  +D++ + NL   E   N VA  LK +  DLP+ L+   L P   EA   
Sbjct: 1300 NKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKI 1359

Query: 294  TTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
              +TE++   + ++K+    NY +  ++I H++ V  +     M   N+SI   PT+
Sbjct: 1360 PDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTL 1416


>gi|229094128 active breakpoint cluster region-related  protein
           isoform c [Homo sapiens]
          Length = 813

 Score =  102 bits (255), Expect = 9e-22
 Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG+ ++   +R    +  ++P + R+C++ VEK G++  GIYR+SG+ + +  LKA +D
Sbjct: 598 VFGVKISVVTKR----ERSKVPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFD 653

Query: 249 REEST---NLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQR 305
                    L D + N +A  LK Y R+LPE LLT  L P F E    +    K      
Sbjct: 654 ANNKDILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMH 713

Query: 306 LLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRV-LYVFFTHV 364
           LL+ LP+ N +   +L+ H+  V  KE   KM++ N++ V  PT+   + V      T  
Sbjct: 714 LLRSLPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSA 773

Query: 365 QELFGNVVLKQV 376
            +++ + V+ QV
Sbjct: 774 ADIWSHDVMAQV 785


>gi|38679957 active breakpoint cluster region-related  protein
           isoform a [Homo sapiens]
          Length = 859

 Score =  102 bits (255), Expect = 9e-22
 Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG+ ++   +R    +  ++P + R+C++ VEK G++  GIYR+SG+ + +  LKA +D
Sbjct: 644 VFGVKISVVTKR----ERSKVPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFD 699

Query: 249 REEST---NLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQR 305
                    L D + N +A  LK Y R+LPE LLT  L P F E    +    K      
Sbjct: 700 ANNKDILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMH 759

Query: 306 LLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRV-LYVFFTHV 364
           LL+ LP+ N +   +L+ H+  V  KE   KM++ N++ V  PT+   + V      T  
Sbjct: 760 LLRSLPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSA 819

Query: 365 QELFGNVVLKQV 376
            +++ + V+ QV
Sbjct: 820 ADIWSHDVMAQV 831


>gi|38679954 active breakpoint cluster region-related  protein
           isoform b [Homo sapiens]
          Length = 822

 Score =  102 bits (255), Expect = 9e-22
 Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG+ ++   +R    +  ++P + R+C++ VEK G++  GIYR+SG+ + +  LKA +D
Sbjct: 607 VFGVKISVVTKR----ERSKVPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFD 662

Query: 249 REEST---NLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQR 305
                    L D + N +A  LK Y R+LPE LLT  L P F E    +    K      
Sbjct: 663 ANNKDILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMH 722

Query: 306 LLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRV-LYVFFTHV 364
           LL+ LP+ N +   +L+ H+  V  KE   KM++ N++ V  PT+   + V      T  
Sbjct: 723 LLRSLPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSA 782

Query: 365 QELFGNVVLKQV 376
            +++ + V+ QV
Sbjct: 783 ADIWSHDVMAQV 794


>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
            sapiens]
          Length = 1499

 Score = 97.1 bits (240), Expect = 5e-20
 Identities = 69/286 (24%), Positives = 135/286 (47%), Gaps = 31/286 (10%)

Query: 89   QEDSSGDEAESP---SKMKRSKGIHVFKKP------------------SFSKKKEKDF-K 126
            Q + SG+ ++S    S ++R + + +  KP                  SFS   + +   
Sbjct: 1126 QSNGSGNGSDSEMDTSSLERGRKVSIVSKPVLYRTRCTRLGRFASYRTSFSVGSDDELGP 1185

Query: 127  IKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQIDVPNL 186
            I++K +++  +  K        +  +D    ++++  +   KK KP   P + +    + 
Sbjct: 1186 IRKKEEDQASQGYKGDNAVIPYETDEDPRRRNILRSLRRNTKKPKPKPRPSITKATWES- 1244

Query: 187  KPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAA 246
               FG+PL      T++     +P     CI+Y+E  G+  EGIYRVSG KS+++ L+  
Sbjct: 1245 -NYFGVPLT-----TVVTPEKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQ 1298

Query: 247  YDREESTNL--EDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQ 304
            +D++ + +L  +D+  NTVA  +K +  +LP+ L+   +     EA       +K+   +
Sbjct: 1299 FDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALK 1358

Query: 305  RLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
             +LK+ P+ N+ +  ++I H++ V        M  +N+SI   PT+
Sbjct: 1359 EVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTL 1404


>gi|156119615 myosin IXA [Homo sapiens]
          Length = 2548

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 88/361 (24%), Positives = 166/361 (45%), Gaps = 40/361 (11%)

Query: 209  LPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDRE-ESTNLEDYEPNTVASLL 267
            +P V  + I+Y+E +G+  EGIYR SG  +K+ EL+   D + ES NL+DY  + +AS+ 
Sbjct: 2075 VPLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDAESVNLDDYNIHVIASVF 2134

Query: 268  KQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDH 327
            KQ+LRDLP  L+T EL   F  A G     E ++    ++ +L   +   +  LI H+  
Sbjct: 2135 KQWLRDLPNPLMTFELYEEFLRAMGLQERKETIRGVYSVIDQLSRTHLNTLERLIFHLVR 2194

Query: 328  VIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVVLKQVMKPLRWSNMAT 387
            +  +E   +M+   ++IV +P +        +      +   +V  + + K      +  
Sbjct: 2195 IALQEDTNRMSANALAIVFAPCI--------LRCPDTTDPLQSV--QDISKTTTCVELIV 2244

Query: 388  MPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAK 447
            +  + + +A +K +I   EF  N               + RL  ++R +   K ++R   
Sbjct: 2245 VEQMNKYKARLK-DISSLEFAEN-------------KAKTRLSLIRRSMG--KGRIRRGN 2288

Query: 448  RQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQI 507
                 + +   + S+S  DVS+E +  +E  +   + ++ +   +QEE +  EQ     +
Sbjct: 2289 YPGPSSPVVVRLPSVS--DVSEETLT-SEAAMETDITEQQQAAMQQEERVLTEQI--ENL 2343

Query: 508  ASEKEE-------IERLRAEIAEIQSRQQHGRSE-TEEYSSESESESEDEEELQIILEDL 559
              EKEE       +E   ++   ++S    G ++ +E  + ESE    ++ E  + L  L
Sbjct: 2344 QKEKEELTFEMLVLEPRASDDETLESEASIGTADSSENLNMESEYAISEKSERSLALSSL 2403

Query: 560  Q 560
            +
Sbjct: 2404 K 2404


>gi|188497642 ARHGAP15 [Homo sapiens]
          Length = 475

 Score = 94.4 bits (233), Expect = 3e-19
 Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 16/238 (6%)

Query: 125 FKIKEKPKEE--KHKEEKHKEEKHKEKKSKDL----TAADVVKQWKEKKKKKKPI-QEPE 177
           FKI+     E   H +   KE+K + +KS       +A+D   + + K + KK I + P 
Sbjct: 205 FKIQRSSSTELLSHYDSDIKEQKPEHRKSLMFRLHHSASDTSDKNRVKSRLKKFITRRPS 264

Query: 178 VPQIDVPNL--KPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSG 235
           +  +    L    IFG  L    ER    +   +P   ++CI+ VEK G+  +GIYRVSG
Sbjct: 265 LKTLQEKGLIKDQIFGSHLHKVCER----ENSTVPWFVKQCIEAVEKRGLDVDGIYRVSG 320

Query: 236 IKSKVDELKAAYDREESTNLEDYE---PNTVASLLKQYLRDLPENLLTKELMPRFEEACG 292
             + + +L+   ++EE  NL+D +    + V   LK + R+LPE L       +F EA  
Sbjct: 321 NLATIQKLRFIVNQEEKLNLDDSQWEDIHVVTGALKMFFRELPEPLFPYSFFEQFVEAIK 380

Query: 293 RTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
           +     +++  + L+++LP  N   +  L  H+  ++AK  +  M+ Q++ IV  PT+
Sbjct: 381 KQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLGIVFGPTL 438


>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
          Length = 1444

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 29/205 (14%)

Query: 190 FGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDR 249
           FG  L + +E +    G  +P V + C +++E +G+  +GIYR+SG+ S +  L+  +  
Sbjct: 19  FGCDLTEYLESS----GQDVPYVLKSCAEFIETHGI-VDGIYRLSGVTSNIQRLRQEFGS 73

Query: 250 EESTNL--EDY--EPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQR 305
           ++  +L  E Y  + + V SL K Y R+LP  LLT EL  +F EA     E  ++   Q 
Sbjct: 74  DQCPDLTREVYLQDIHCVGSLCKLYFRELPNPLLTYELYEKFTEAVSHCPEEGQLARIQN 133

Query: 306 LLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSP----------------- 348
           +++ELP  +Y  + +LI H+ H+ +   +T M+ +N+++V +P                 
Sbjct: 134 VIQELPPSHYRTLEYLIRHLAHIASFSSKTNMHARNLALVWAPNLLRSKEIEATGCNGDA 193

Query: 349 ---TVQISNRVLYVFFTHVQELFGN 370
               V++   V+     HV ++F N
Sbjct: 194 AFLAVRVQQVVIEFILNHVDQIFNN 218


>gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo
           sapiens]
          Length = 655

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 9/170 (5%)

Query: 187 KPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAA 246
           K IFG  L D V     Y     P +  +C+D++ + G+K EG++R+ G  + V EL+ A
Sbjct: 37  KGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDA 96

Query: 247 YDREESTNLE-DYEPNTVASLLKQYLRDLPENLLTKELMPRFEE--ACGRTTETEK---V 300
           +D  E  + + + + +TVASLLK YLR+LPE ++      ++E+  +C +    E+   V
Sbjct: 97  FDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIP---YAKYEDFLSCAKLLSKEEEAGV 153

Query: 301 QEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
           +E  + +K LP  NY L+ ++   +D V +     KM++QN++ V  P +
Sbjct: 154 KELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNI 203


>gi|26986534 Rho GTPase activating protein 12 [Homo sapiens]
          Length = 846

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 66/231 (28%), Positives = 120/231 (51%), Gaps = 12/231 (5%)

Query: 126 KIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPI-QEPEVPQIDVP 184
           +I + P  EKH +EK +++  K +  K +++ D  +Q K KK  KK + + P +  +   
Sbjct: 588 EIPDSPGIEKHDKEKEQKDPKKLRSFK-VSSIDSSEQKKTKKNLKKFLTRRPTLQAVREK 646

Query: 185 NL--KPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDE 242
                 +FG  LA+  +R    +   +P   + CI++VE++G+  +GIYRVSG  + + +
Sbjct: 647 GYIKDQVFGSNLANLCQR----ENGTVPKFVKLCIEHVEEHGLDIDGIYRVSGNLAVIQK 702

Query: 243 LKAAYDREESTNLED---YEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEK 299
           L+ A + +E  +L D    + + +   LK + R+LPE L T      F  A  +    ++
Sbjct: 703 LRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAI-KQEPRQR 761

Query: 300 VQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
           V   + L+++LP+ N   +  L  H+  VI    + +M  Q+I+IV  PT+
Sbjct: 762 VAAVKDLIRQLPKPNQDTMQILFRHLRRVIENGEKNRMTYQSIAIVFGPTL 812


>gi|56119110 family with sequence similarity 13, member A1 isoform a
           [Homo sapiens]
          Length = 1023

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 55/184 (29%), Positives = 100/184 (54%), Gaps = 4/184 (2%)

Query: 166 KKKKKKPIQEPEVPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGM 225
           K+  KK +  P   Q D    K +FG+ L +   + +  +GI  PAV    ++Y+ ++G+
Sbjct: 18  KEDMKKIVAVPLNEQKDFTYQK-LFGVSLQELERQGLTENGI--PAVVWNIVEYLTQHGL 74

Query: 226 KCEGIYRVSGIKSKVDELKAAYDREESTNL-EDYEPNTVASLLKQYLRDLPENLLTKELM 284
             EG++RV+G    V++L+  ++      L +D +  + ASLLK +LR+LP++L+T  L 
Sbjct: 75  TQEGLFRVNGNVKVVEQLRLKFESGVPVELGKDGDVCSAASLLKLFLRELPDSLITSALQ 134

Query: 285 PRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISI 344
           PRF +         +    + L+KELP+ +Y L+ +L   +  V    ++ +MN+ N++ 
Sbjct: 135 PRFIQLFQDGRNDVQESSLRDLIKELPDTHYCLLKYLCQFLTKVAKHHVQNRMNVHNLAT 194

Query: 345 VLSP 348
           V  P
Sbjct: 195 VFGP 198


>gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo
           sapiens]
          Length = 653

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 9/168 (5%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           IFG  L D V     Y     P +  +C+D++ + G+K EG++R+ G  + V EL+ A+D
Sbjct: 37  IFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFD 96

Query: 249 REESTNLE-DYEPNTVASLLKQYLRDLPENLLTKELMPRFEE--ACGRTTETEK---VQE 302
             E  + + + + +TVASLLK YLR+LPE ++      ++E+  +C +    E+   V+E
Sbjct: 97  CGEKPSFDSNTDVHTVASLLKLYLRELPEPVIP---YAKYEDFLSCAKLLSKEEEAGVKE 153

Query: 303 FQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
             + +K LP  NY L+ ++   +D V +     KM++QN++ V  P +
Sbjct: 154 LAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNI 201


>gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo
           sapiens]
          Length = 748

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 9/168 (5%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           IFG  L D V     Y     P +  +C+D++ + G+K EG++R+ G  + V EL+ A+D
Sbjct: 132 IFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFD 191

Query: 249 REESTNLE-DYEPNTVASLLKQYLRDLPENLLTKELMPRFEE--ACGRTTETEK---VQE 302
             E  + + + + +TVASLLK YLR+LPE ++      ++E+  +C +    E+   V+E
Sbjct: 192 CGEKPSFDSNTDVHTVASLLKLYLRELPEPVIP---YAKYEDFLSCAKLLSKEEEAGVKE 248

Query: 303 FQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
             + +K LP  NY L+ ++   +D V +     KM++QN++ V  P +
Sbjct: 249 LAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNI 296


>gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]
          Length = 459

 Score = 89.7 bits (221), Expect = 7e-18
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 8/176 (4%)

Query: 182 DVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVD 241
           D+ ++K ++   L   V+        + P V   CI  +E  G+  EG+YRVSG    ++
Sbjct: 258 DLKHVKKVYSCDLTTLVKAHTT----KRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIE 313

Query: 242 ELKAAYDRE---ESTNLEDYEP-NTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTET 297
           ++K A+DR+      ++  YE  N +   LK Y RDLP  L+T +  P+F E+       
Sbjct: 314 DVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPD 373

Query: 298 EKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQIS 353
           E+++     LK LP  +   + +L+ H+  V   E E  MN +N+ IV  PT+  S
Sbjct: 374 EQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRS 429


>gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]
          Length = 433

 Score = 89.7 bits (221), Expect = 7e-18
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 8/176 (4%)

Query: 182 DVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVD 241
           D+ ++K ++   L   V+        + P V   CI  +E  G+  EG+YRVSG    ++
Sbjct: 232 DLKHVKKVYSCDLTTLVKAHTT----KRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIE 287

Query: 242 ELKAAYDRE---ESTNLEDYEP-NTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTET 297
           ++K A+DR+      ++  YE  N +   LK Y RDLP  L+T +  P+F E+       
Sbjct: 288 DVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPD 347

Query: 298 EKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQIS 353
           E+++     LK LP  +   + +L+ H+  V   E E  MN +N+ IV  PT+  S
Sbjct: 348 EQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRS 403


>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
          Length = 2087

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 51/172 (29%), Positives = 97/172 (56%), Gaps = 9/172 (5%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG  L +     ++  G  +P V + C  ++E+YG+  +GIYR+SG+ S +  L+  +D
Sbjct: 369 VFGCDLGEH----LLNSGFEVPQVLQSCTAFIERYGI-VDGIYRLSGVASNIQRLRHEFD 423

Query: 249 REESTNL--EDY--EPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQ 304
            E   +L  E Y  + ++V SL K Y R+LP  LLT +L  +F +A    T+ E++ +  
Sbjct: 424 SEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIH 483

Query: 305 RLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRV 356
            ++++LP  +Y  + +L+ H+  +      T M+ +N++IV +P +  S ++
Sbjct: 484 DVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQI 535


>gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]
          Length = 1738

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 51/172 (29%), Positives = 97/172 (56%), Gaps = 9/172 (5%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG  L +     ++  G  +P V + C  ++E+YG+  +GIYR+SG+ S +  L+  +D
Sbjct: 20  VFGCDLGEH----LLNSGFEVPQVLQSCTAFIERYGI-VDGIYRLSGVASNIQRLRHEFD 74

Query: 249 REESTNL--EDY--EPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQ 304
            E   +L  E Y  + ++V SL K Y R+LP  LLT +L  +F +A    T+ E++ +  
Sbjct: 75  SEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIH 134

Query: 305 RLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRV 356
            ++++LP  +Y  + +L+ H+  +      T M+ +N++IV +P +  S ++
Sbjct: 135 DVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQI 186


>gi|4757980 beta chimerin isoform 2 [Homo sapiens]
          Length = 468

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 7/178 (3%)

Query: 178 VPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIK 237
           VP    P+LK I  +   D       ++  R P V   CI  +E  G+K EG+YRVSG  
Sbjct: 260 VPNDCQPDLKRIKKVYCCDLTTLVKAHNTQR-PMVVDICIREIEARGLKSEGLYRVSGFT 318

Query: 238 SKVDELKAAYDREE-----STNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACG 292
             ++++K A+DR+      S N+   + N +   LK Y RDLP  ++T +   +F +A  
Sbjct: 319 EHIEDVKMAFDRDGEKADISANVYP-DINIITGALKLYFRDLPIPVITYDTYSKFIDAAK 377

Query: 293 RTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
            +   E+++    +L  LP  +Y  + +L++H+  V   E +  MN +N+ IV  PT+
Sbjct: 378 ISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTL 435


>gi|91106928 beta chimerin isoform 1 [Homo sapiens]
          Length = 332

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 7/178 (3%)

Query: 178 VPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIK 237
           VP    P+LK I  +   D       ++  R P V   CI  +E  G+K EG+YRVSG  
Sbjct: 124 VPNDCQPDLKRIKKVYCCDLTTLVKAHNTQR-PMVVDICIREIEARGLKSEGLYRVSGFT 182

Query: 238 SKVDELKAAYDREE-----STNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACG 292
             ++++K A+DR+      S N+   + N +   LK Y RDLP  ++T +   +F +A  
Sbjct: 183 EHIEDVKMAFDRDGEKADISANVYP-DINIITGALKLYFRDLPIPVITYDTYSKFIDAAK 241

Query: 293 RTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
            +   E+++    +L  LP  +Y  + +L++H+  V   E +  MN +N+ IV  PT+
Sbjct: 242 ISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTL 299


>gi|23510413 sorting nexin 26 [Homo sapiens]
          Length = 1126

 Score = 87.8 bits (216), Expect = 3e-17
 Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 29/215 (13%)

Query: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYD 248
           +FG  L + +  +    G  +P V R C +++E +G+  +GIYR+SG+ S +  L+  +D
Sbjct: 312 VFGCDLGEHLSNS----GQDVPQVLRCCSEFIEAHGV-VDGIYRLSGVSSNIQRLRHEFD 366

Query: 249 REESTNLED----YEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQ 304
            E    L       + ++V+SL K Y R+LP  LLT +L  +F EA     E E++    
Sbjct: 367 SERIPELSGPAFLQDIHSVSSLCKLYFRELPNPLLTYQLYGKFSEAMSVPGEEERLVRVH 426

Query: 305 RLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPT--------------- 349
            ++++LP  +Y  + +L+ H+  +      T M+ +N++IV +P                
Sbjct: 427 DVIQQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRSMELESVGMGGA 486

Query: 350 -----VQISNRVLYVFFTHVQELFGNVVLKQVMKP 379
                V++ + V+    THV  LF +      + P
Sbjct: 487 AAFREVRVQSVVVEFLLTHVDVLFSDTFTSAGLDP 521


>gi|54860079 nadrin isoform 1 [Homo sapiens]
          Length = 881

 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 26/235 (11%)

Query: 138 EEKHKEEKHKEKKSKDLTAADV-----------------VKQWKEKKKKKKPIQEPEVPQ 180
           +E+  E  +K ++ KD  AAD+                 ++   +  +K   + E  +P+
Sbjct: 177 KEEMDEAGNKVEQCKDQLAADMYNFMAKEGEYGKFFVTLLEAQADYHRKALAVLEKTLPE 236

Query: 181 I----DVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGI 236
           +    D    KP FG PL + ++R+    G  +      C+  + + GMK EG++R+   
Sbjct: 237 MRAHQDKWAEKPAFGTPLEEHLKRS----GREIALPIEACVMLLLETGMKEEGLFRIGAG 292

Query: 237 KSKVDELKAAYDREESTNLEDY-EPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTT 295
            SK+ +LKAA D   S   E Y +P+ VA  LK YLR+LPE L+T  L   + +      
Sbjct: 293 ASKLKKLKAALDCSTSHLDEFYSDPHAVAGALKSYLRELPEPLMTFNLYEEWTQVASVQD 352

Query: 296 ETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
           + +K+Q+  R  ++LP  N++   +LI  +  +       KM   NI+IVL P +
Sbjct: 353 QDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLAQTSDVNKMTPSNIAIVLGPNL 407


>gi|54860105 nadrin isoform 2 [Homo sapiens]
          Length = 803

 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 26/235 (11%)

Query: 138 EEKHKEEKHKEKKSKDLTAADV-----------------VKQWKEKKKKKKPIQEPEVPQ 180
           +E+  E  +K ++ KD  AAD+                 ++   +  +K   + E  +P+
Sbjct: 177 KEEMDEAGNKVEQCKDQLAADMYNFMAKEGEYGKFFVTLLEAQADYHRKALAVLEKTLPE 236

Query: 181 I----DVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGI 236
           +    D    KP FG PL + ++R+    G  +      C+  + + GMK EG++R+   
Sbjct: 237 MRAHQDKWAEKPAFGTPLEEHLKRS----GREIALPIEACVMLLLETGMKEEGLFRIGAG 292

Query: 237 KSKVDELKAAYDREESTNLEDY-EPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTT 295
            SK+ +LKAA D   S   E Y +P+ VA  LK YLR+LPE L+T  L   + +      
Sbjct: 293 ASKLKKLKAALDCSTSHLDEFYSDPHAVAGALKSYLRELPEPLMTFNLYEEWTQVASVQD 352

Query: 296 ETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
           + +K+Q+  R  ++LP  N++   +LI  +  +       KM   NI+IVL P +
Sbjct: 353 QDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLAQTSDVNKMTPSNIAIVLGPNL 407


>gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]
          Length = 663

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 49/167 (29%), Positives = 95/167 (56%), Gaps = 6/167 (3%)

Query: 189 IFGIPLADAVERTMM-YDGIRLPAVFRECIDYVEKYGMKCEGIYRVSG----IKSKVDEL 243
           +F +PL   +E+      G+R+P +F++ I  +E+ G++ EG+ R+ G    IK+   EL
Sbjct: 321 LFCVPLTALLEQDQRKVPGMRIPLIFQKLISRIEERGLETEGLLRIPGAAIRIKNLCQEL 380

Query: 244 KAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEF 303
           +A +  E + N E  + +  ASLLK ++R+LP+ LL+ E +  F+      T+ +++Q  
Sbjct: 381 EAKF-YEGTFNWESVKQHDAASLLKLFIRELPQPLLSVEYLKAFQAVQNLPTKKQQLQAL 439

Query: 304 QRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
             L+  LP+ N   +  L+  +  VI  + + KM + N+++V++P +
Sbjct: 440 NLLVILLPDANRDTLKALLEFLQRVIDNKEKNKMTVMNVAMVMAPNL 486


>gi|206597515 ArfGAP with RhoGAP domain, ankyrin repeat and PH
           domain 1 isoform d [Homo sapiens]
          Length = 1133

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 3/168 (1%)

Query: 209 LPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDRE-ESTNLEDYEPNT--VAS 265
           +P +   C+DY+ + G+  EGIYR  G  SK   L  +  ++  S +L++ E +   V+S
Sbjct: 664 IPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLLESLRQDARSVHLKEGEQHVDDVSS 723

Query: 266 LLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHM 325
            LK++LRDLP+ L T+     + EA     E EKV  ++ LL  LP  N   +  LI H+
Sbjct: 724 ALKRFLRDLPDGLFTRAQRLTWLEASEIEDEEEKVSRYRELLVRLPPVNRATVKALISHL 783

Query: 326 DHVIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVVL 373
             V       +MN+ N++IV  PT+  ++   Y     V++L  + V+
Sbjct: 784 YCVQCFSDTNQMNVHNLAIVFGPTLFQTDGQDYKAGRVVEDLINHYVV 831


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.129    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,135,762
Number of Sequences: 37866
Number of extensions: 1456112
Number of successful extensions: 28356
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 1211
Number of HSP's that attempted gapping in prelim test: 10448
Number of HSP's gapped (non-prelim): 10936
length of query: 655
length of database: 18,247,518
effective HSP length: 109
effective length of query: 546
effective length of database: 14,120,124
effective search space: 7709587704
effective search space used: 7709587704
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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