Guide to the Human Genome
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Name: GRLF1 Sequence: fasta or formatted (1499aa) NCBI GI: 150417981
Description:

glucocorticoid receptor DNA binding factor 1

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         75           3
 C cysteine            1.8         27           1
 D aspartate           5.9         89           2
 E glutamate           7.7        116           3
 F phenylalanine       4.2         63           3
 G glycine             4.2         63           2
 H histidine           2.7         41           1
 I isoleucine          5.9         88           2
 K lysine              7.1        107           2
 L leucine             9.9        148           3
 M methionine          2.0         30           3
 N asparagine          4.6         69           2
 P proline             5.9         88           3
 Q glutamine           4.7         71           2
 R arginine            5.3         80           3
 S serine              8.7        130           3
 T threonine           4.9         73           2
 V valine              5.9         88           3
 W tryptophan          0.7         10           1
 Y tyrosine            2.9         43           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucocorticoid receptor DNA binding factor 1 
ARHGAP5               0.484   Rho GTPase activating protein 5 isoform b 
ARHGAP5               0.482   Rho GTPase activating protein 5 isoform a 
ARHGAP27              0.037   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.037   Rho GTPase activating protein 27 isoform a 
CHN2                  0.034   beta chimerin isoform 2 
CHN2                  0.034   beta chimerin isoform 1 
CHN1                  0.034   chimerin (chimaerin) 1 isoform a 
CHN1                  0.034   chimerin (chimaerin) 1 isoform b 
ARHGAP15              0.032   ARHGAP15 
ARHGAP12              0.032   Rho GTPase activating protein 12 
ARHGAP23              0.031   Rho GTPase activating protein 23 
ARHGAP21              0.030   Rho GTPase activating protein 21 
OPHN1                 0.029   oligophrenin 1 
ARHGAP10              0.029   Rho GTPase activating protein 10 
FLJ32810              0.027   Rho-type GTPase-activating protein FLJ32810 
ABR                   0.027   active breakpoint cluster region-related  protein i...
ABR                   0.027   active breakpoint cluster region-related  protein is...
ABR                   0.027   active breakpoint cluster region-related  protein is...
RICH2                 0.026   Rho GTPase-activating protein RICH2 
ARHGAP26              0.026   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.026   GTPase regulator associated with the focal adhesion k...
ARHGAP9               0.026   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.026   Rho GTPase activating protein 9 isoform 3 
BCR                   0.026   breakpoint cluster region isoform 2 
BCR                   0.026   breakpoint cluster region isoform 1 
SRGAP1                0.025   SLIT-ROBO Rho GTPase activating protein 1 
MYO9B                 0.025   myosin IXB isoform 2 
MYO9B                 0.025   myosin IXB isoform 1 
SRGAP3                0.025   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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