Guide to the Human Genome
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Name: ARAP1 Sequence: fasta or formatted (1133aa) NCBI GI: 206597515
Description:

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform d

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [1205aa] ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform a
alt prot [1450aa] ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         88           3
 C cysteine            2.1         24           2
 D aspartate           5.0         57           2
 E glutamate           9.3        105           3
 F phenylalanine       3.6         41           1
 G glycine             6.6         75           2
 H histidine           2.6         29           1
 I isoleucine          3.6         41           1
 K lysine              4.9         55           3
 L leucine            10.5        119           2
 M methionine          1.8         20           2
 N asparagine          2.3         26           2
 P proline             4.8         54           3
 Q glutamine           4.1         47           2
 R arginine            7.4         84           3
 S serine              6.9         78           2
 T threonine           4.9         56           3
 V valine              7.4         84           3
 W tryptophan          1.7         19           1
 Y tyrosine            2.7         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ArfGAP with RhoGAP domain, ankyrin repeat and PH do... 
ARAP1                 0.685   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP1                 0.685   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARAP2                 0.309   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARAP3                 0.176   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARHGAP23              0.033   Rho GTPase activating protein 23 
GRLF1                 0.033   glucocorticoid receptor DNA binding factor 1 
MYO9B                 0.032   myosin IXB isoform 2 
MYO9B                 0.032   myosin IXB isoform 1 
MYO9A                 0.032   myosin IXA 
ARHGAP27              0.031   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.031   Rho GTPase activating protein 27 isoform a 
ARHGAP22              0.031   Rho GTPase activating protein 2 
ARHGAP21              0.030   Rho GTPase activating protein 21 
ARHGAP15              0.030   ARHGAP15 
HMHA1                 0.029   minor histocompatibility antigen HA-1 
ARHGAP5               0.029   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.029   Rho GTPase activating protein 5 isoform b 
FAM13A                0.029   family with sequence similarity 13, member A1 isofor...
ARHGAP26              0.028   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.028   GTPase regulator associated with the focal adhesion k...
BCR                   0.027   breakpoint cluster region isoform 2 
BCR                   0.027   breakpoint cluster region isoform 1 
SRGAP3                0.027   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP3                0.027   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP24              0.027   Rho GTPase activating protein 24 isoform 1 
ARHGAP10              0.027   Rho GTPase activating protein 10 
CHN1                  0.027   chimerin (chimaerin) 1 isoform a 
CHN1                  0.027   chimerin (chimaerin) 1 isoform b 
RALBP1                0.026   ralA binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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